Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
UBE2D4Q9Y2X8 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
UBE2D4Q9Y2X8 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
UBE2D4Q9Y2X8 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
UBE2D4Q9Y2X8 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC11.85□□□□□ -0.51
UBE2D4Q9Y2X8 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
UBE2D4Q9Y2X8 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
UBE2D4Q9Y2X8 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC11.85□□□□□ -0.51
UBE2D4Q9Y2X8 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
UBE2D4Q9Y2X8 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
UBE2D4Q9Y2X8 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC11.85□□□□□ -0.51
UBE2D4Q9Y2X8 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
UBE2D4Q9Y2X8 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
UBE2D4Q9Y2X8 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC11.85□□□□□ -0.51
UBE2D4Q9Y2X8 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
UBE2D4Q9Y2X8 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
UBE2D4Q9Y2X8 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC11.85□□□□□ -0.51
UBE2D4Q9Y2X8 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
UBE2D4Q9Y2X8 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
UBE2D4Q9Y2X8 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
UBE2D4Q9Y2X8 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC11.85□□□□□ -0.51
UBE2D4Q9Y2X8 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
UBE2D4Q9Y2X8 AC112907.2-201ENST00000448639 330 ntBASIC11.85□□□□□ -0.51
UBE2D4Q9Y2X8 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC11.85□□□□□ -0.51
UBE2D4Q9Y2X8 HOMER2P1-201ENST00000455653 964 ntBASIC11.85□□□□□ -0.51
UBE2D4Q9Y2X8 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC11.85□□□□□ -0.51
UBE2D4Q9Y2X8 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
UBE2D4Q9Y2X8 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC11.85□□□□□ -0.51
UBE2D4Q9Y2X8 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC11.85□□□□□ -0.51
UBE2D4Q9Y2X8 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
UBE2D4Q9Y2X8 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
UBE2D4Q9Y2X8 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC11.85□□□□□ -0.51
UBE2D4Q9Y2X8 AC073912.3-201ENST00000624414 853 ntBASIC11.85□□□□□ -0.51
UBE2D4Q9Y2X8 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC11.85□□□□□ -0.51
UBE2D4Q9Y2X8 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
UBE2D4Q9Y2X8 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
UBE2D4Q9Y2X8 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
UBE2D4Q9Y2X8 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
UBE2D4Q9Y2X8 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC11.85□□□□□ -0.51
UBE2D4Q9Y2X8 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC11.85□□□□□ -0.51
UBE2D4Q9Y2X8 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
UBE2D4Q9Y2X8 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
UBE2D4Q9Y2X8 AL365203.3-201ENST00000609742 2057 ntBASIC11.85□□□□□ -0.51
UBE2D4Q9Y2X8 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
UBE2D4Q9Y2X8 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
UBE2D4Q9Y2X8 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
UBE2D4Q9Y2X8 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
UBE2D4Q9Y2X8 AC105917.1-201ENST00000506637 2539 ntBASIC11.85□□□□□ -0.51
UBE2D4Q9Y2X8 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
UBE2D4Q9Y2X8 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
UBE2D4Q9Y2X8 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
UBE2D4Q9Y2X8 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC11.85□□□□□ -0.51
UBE2D4Q9Y2X8 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC11.85□□□□□ -0.51
UBE2D4Q9Y2X8 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
UBE2D4Q9Y2X8 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC11.84□□□□□ -0.51
UBE2D4Q9Y2X8 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
UBE2D4Q9Y2X8 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
UBE2D4Q9Y2X8 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
UBE2D4Q9Y2X8 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
UBE2D4Q9Y2X8 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
UBE2D4Q9Y2X8 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
UBE2D4Q9Y2X8 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
UBE2D4Q9Y2X8 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC11.84□□□□□ -0.51
UBE2D4Q9Y2X8 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
UBE2D4Q9Y2X8 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
UBE2D4Q9Y2X8 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
UBE2D4Q9Y2X8 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
UBE2D4Q9Y2X8 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
UBE2D4Q9Y2X8 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
UBE2D4Q9Y2X8 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC11.84□□□□□ -0.51
UBE2D4Q9Y2X8 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
UBE2D4Q9Y2X8 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
UBE2D4Q9Y2X8 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
UBE2D4Q9Y2X8 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
UBE2D4Q9Y2X8 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC11.84□□□□□ -0.51
UBE2D4Q9Y2X8 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC11.84□□□□□ -0.51
UBE2D4Q9Y2X8 HLA-J-202ENST00000469281 1241 ntBASIC11.84□□□□□ -0.51
UBE2D4Q9Y2X8 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
UBE2D4Q9Y2X8 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC11.84□□□□□ -0.51
UBE2D4Q9Y2X8 CD320-202ENST00000537716 1119 ntTSL 2 BASIC11.84□□□□□ -0.51
UBE2D4Q9Y2X8 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC11.84□□□□□ -0.51
UBE2D4Q9Y2X8 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC11.84□□□□□ -0.51
UBE2D4Q9Y2X8 AC005336.2-201ENST00000593183 939 ntBASIC11.84□□□□□ -0.51
UBE2D4Q9Y2X8 AL353801.3-201ENST00000609898 542 ntBASIC11.84□□□□□ -0.51
UBE2D4Q9Y2X8 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
UBE2D4Q9Y2X8 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC11.84□□□□□ -0.51
UBE2D4Q9Y2X8 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC11.84□□□□□ -0.51
UBE2D4Q9Y2X8 ME2P1-201ENST00000426028 1970 ntBASIC11.84□□□□□ -0.51
UBE2D4Q9Y2X8 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
UBE2D4Q9Y2X8 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
UBE2D4Q9Y2X8 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
UBE2D4Q9Y2X8 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
UBE2D4Q9Y2X8 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
UBE2D4Q9Y2X8 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
UBE2D4Q9Y2X8 ACE-204ENST00000428043 5120 ntTSL 2 BASIC11.84□□□□□ -0.51
UBE2D4Q9Y2X8 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
UBE2D4Q9Y2X8 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC11.84□□□□□ -0.51
UBE2D4Q9Y2X8 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC11.84□□□□□ -0.51
UBE2D4Q9Y2X8 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
UBE2D4Q9Y2X8 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms