Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.88■□□□□ 0.45
CDH9Q9ULB4 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.88■□□□□ 0.45
CDH9Q9ULB4 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CDH9Q9ULB4 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.88■□□□□ 0.45
CDH9Q9ULB4 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CDH9Q9ULB4 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CDH9Q9ULB4 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDH9Q9ULB4 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CDH9Q9ULB4 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CDH9Q9ULB4 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.87■□□□□ 0.45
CDH9Q9ULB4 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH9Q9ULB4 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH9Q9ULB4 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH9Q9ULB4 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CDH9Q9ULB4 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH9Q9ULB4 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
CDH9Q9ULB4 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH9Q9ULB4 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH9Q9ULB4 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.87■□□□□ 0.45
CDH9Q9ULB4 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.87■□□□□ 0.45
CDH9Q9ULB4 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH9Q9ULB4 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.87■□□□□ 0.45
CDH9Q9ULB4 AP006288.1-201ENST00000446065 395 ntBASIC17.87■□□□□ 0.45
CDH9Q9ULB4 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.87■□□□□ 0.45
CDH9Q9ULB4 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.87■□□□□ 0.45
CDH9Q9ULB4 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
CDH9Q9ULB4 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.87■□□□□ 0.45
CDH9Q9ULB4 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.87■□□□□ 0.45
CDH9Q9ULB4 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.87■□□□□ 0.45
CDH9Q9ULB4 CYP2A7P1-201ENST00000595391 815 ntBASIC17.87■□□□□ 0.45
CDH9Q9ULB4 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.87■□□□□ 0.45
CDH9Q9ULB4 AC079781.4-201ENST00000641908 219 ntBASIC17.87■□□□□ 0.45
CDH9Q9ULB4 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH9Q9ULB4 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CDH9Q9ULB4 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH9Q9ULB4 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH9Q9ULB4 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH9Q9ULB4 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CDH9Q9ULB4 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.87■□□□□ 0.45
CDH9Q9ULB4 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH9Q9ULB4 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CDH9Q9ULB4 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH9Q9ULB4 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH9Q9ULB4 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CDH9Q9ULB4 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CDH9Q9ULB4 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.87■□□□□ 0.45
CDH9Q9ULB4 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH9Q9ULB4 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.87■□□□□ 0.45
CDH9Q9ULB4 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH9Q9ULB4 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH9Q9ULB4 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH9Q9ULB4 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.87■□□□□ 0.45
CDH9Q9ULB4 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH9Q9ULB4 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH9Q9ULB4 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH9Q9ULB4 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDH9Q9ULB4 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH9Q9ULB4 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.86■□□□□ 0.45
CDH9Q9ULB4 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH9Q9ULB4 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH9Q9ULB4 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDH9Q9ULB4 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH9Q9ULB4 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDH9Q9ULB4 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDH9Q9ULB4 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CDH9Q9ULB4 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.86■□□□□ 0.45
CDH9Q9ULB4 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.86■□□□□ 0.45
CDH9Q9ULB4 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.86■□□□□ 0.45
CDH9Q9ULB4 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CDH9Q9ULB4 AL009183.1-201ENST00000603760 355 ntBASIC17.86■□□□□ 0.45
CDH9Q9ULB4 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
CDH9Q9ULB4 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.86■□□□□ 0.45
CDH9Q9ULB4 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.86■□□□□ 0.45
CDH9Q9ULB4 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH9Q9ULB4 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH9Q9ULB4 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH9Q9ULB4 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.86■□□□□ 0.45
CDH9Q9ULB4 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH9Q9ULB4 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.86■□□□□ 0.45
CDH9Q9ULB4 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH9Q9ULB4 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDH9Q9ULB4 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDH9Q9ULB4 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
CDH9Q9ULB4 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDH9Q9ULB4 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDH9Q9ULB4 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
CDH9Q9ULB4 RNU1-129P-201ENST00000384064 167 ntBASIC17.85■□□□□ 0.45
CDH9Q9ULB4 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDH9Q9ULB4 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
CDH9Q9ULB4 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.85■□□□□ 0.45
CDH9Q9ULB4 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.85■□□□□ 0.45
CDH9Q9ULB4 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.85■□□□□ 0.45
CDH9Q9ULB4 LTB4R2-202ENST00000528054 3092 ntBASIC17.85■□□□□ 0.45
CDH9Q9ULB4 AC109635.5-201ENST00000533593 962 ntBASIC17.85■□□□□ 0.45
CDH9Q9ULB4 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.85■□□□□ 0.45
CDH9Q9ULB4 MIR3909-201ENST00000579518 119 ntBASIC17.85■□□□□ 0.45
CDH9Q9ULB4 U1.21-201ENST00000580816 167 ntBASIC17.85■□□□□ 0.45
CDH9Q9ULB4 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.85■□□□□ 0.45
CDH9Q9ULB4 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDH9Q9ULB4 AC013467.2-201ENST00000605472 835 ntBASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms