Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
DNMT3BQ9UBC3 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
DNMT3BQ9UBC3 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
DNMT3BQ9UBC3 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
DNMT3BQ9UBC3 AC093525.9-201ENST00000624961 1746 ntBASIC17.61■□□□□ 0.41
DNMT3BQ9UBC3 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.61■□□□□ 0.41
DNMT3BQ9UBC3 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.61■□□□□ 0.41
DNMT3BQ9UBC3 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DNMT3BQ9UBC3 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.6■□□□□ 0.41
DNMT3BQ9UBC3 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.6■□□□□ 0.41
DNMT3BQ9UBC3 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.6■□□□□ 0.41
DNMT3BQ9UBC3 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.6■□□□□ 0.41
DNMT3BQ9UBC3 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
DNMT3BQ9UBC3 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
DNMT3BQ9UBC3 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
DNMT3BQ9UBC3 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DNMT3BQ9UBC3 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DNMT3BQ9UBC3 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DNMT3BQ9UBC3 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
DNMT3BQ9UBC3 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
DNMT3BQ9UBC3 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.6■□□□□ 0.41
DNMT3BQ9UBC3 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
DNMT3BQ9UBC3 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
DNMT3BQ9UBC3 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
DNMT3BQ9UBC3 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.6■□□□□ 0.41
DNMT3BQ9UBC3 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.6■□□□□ 0.41
DNMT3BQ9UBC3 AC087641.1-201ENST00000557561 1021 ntBASIC17.6■□□□□ 0.41
DNMT3BQ9UBC3 AC027307.2-201ENST00000591252 911 ntBASIC17.6■□□□□ 0.41
DNMT3BQ9UBC3 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.6■□□□□ 0.41
DNMT3BQ9UBC3 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
DNMT3BQ9UBC3 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DNMT3BQ9UBC3 AC016396.2-201ENST00000562575 1417 ntBASIC17.6■□□□□ 0.41
DNMT3BQ9UBC3 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.6■□□□□ 0.41
DNMT3BQ9UBC3 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DNMT3BQ9UBC3 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DNMT3BQ9UBC3 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DNMT3BQ9UBC3 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
DNMT3BQ9UBC3 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
DNMT3BQ9UBC3 LINC00896-202ENST00000609602 2128 ntBASIC17.6■□□□□ 0.41
DNMT3BQ9UBC3 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DNMT3BQ9UBC3 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DNMT3BQ9UBC3 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.6■□□□□ 0.41
DNMT3BQ9UBC3 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DNMT3BQ9UBC3 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DNMT3BQ9UBC3 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
DNMT3BQ9UBC3 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DNMT3BQ9UBC3 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.59■□□□□ 0.41
DNMT3BQ9UBC3 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.59■□□□□ 0.41
DNMT3BQ9UBC3 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.59■□□□□ 0.41
DNMT3BQ9UBC3 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
DNMT3BQ9UBC3 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DNMT3BQ9UBC3 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DNMT3BQ9UBC3 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
DNMT3BQ9UBC3 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC17.59■□□□□ 0.41
DNMT3BQ9UBC3 MIR346-201ENST00000362234 95 ntBASIC17.59■□□□□ 0.41
DNMT3BQ9UBC3 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
DNMT3BQ9UBC3 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.59■□□□□ 0.41
DNMT3BQ9UBC3 SPDYE7P-202ENST00000420373 878 ntBASIC17.59■□□□□ 0.41
DNMT3BQ9UBC3 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.59■□□□□ 0.41
DNMT3BQ9UBC3 UGT1A2P-201ENST00000454886 866 ntBASIC17.59■□□□□ 0.41
DNMT3BQ9UBC3 TAF8-206ENST00000472818 719 ntTSL 2 BASIC17.59■□□□□ 0.41
DNMT3BQ9UBC3 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.59■□□□□ 0.41
DNMT3BQ9UBC3 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC17.59■□□□□ 0.41
DNMT3BQ9UBC3 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.59■□□□□ 0.41
DNMT3BQ9UBC3 ALG1L8P-201ENST00000533887 760 ntBASIC17.59■□□□□ 0.41
DNMT3BQ9UBC3 AP000842.3-202ENST00000569238 1080 ntBASIC17.59■□□□□ 0.41
DNMT3BQ9UBC3 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
DNMT3BQ9UBC3 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DNMT3BQ9UBC3 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.59■□□□□ 0.41
DNMT3BQ9UBC3 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.59■□□□□ 0.41
DNMT3BQ9UBC3 AC239800.4-201ENST00000603712 296 ntBASIC17.59■□□□□ 0.41
DNMT3BQ9UBC3 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
DNMT3BQ9UBC3 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.59■□□□□ 0.41
DNMT3BQ9UBC3 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
DNMT3BQ9UBC3 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
DNMT3BQ9UBC3 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
DNMT3BQ9UBC3 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DNMT3BQ9UBC3 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DNMT3BQ9UBC3 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DNMT3BQ9UBC3 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
DNMT3BQ9UBC3 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
DNMT3BQ9UBC3 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
DNMT3BQ9UBC3 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.58■□□□□ 0.41
DNMT3BQ9UBC3 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
DNMT3BQ9UBC3 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.58■□□□□ 0.41
DNMT3BQ9UBC3 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
DNMT3BQ9UBC3 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
DNMT3BQ9UBC3 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.41
DNMT3BQ9UBC3 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
DNMT3BQ9UBC3 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
DNMT3BQ9UBC3 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.58■□□□□ 0.4
DNMT3BQ9UBC3 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
DNMT3BQ9UBC3 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC17.58■□□□□ 0.4
DNMT3BQ9UBC3 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
DNMT3BQ9UBC3 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.4
DNMT3BQ9UBC3 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.58■□□□□ 0.4
DNMT3BQ9UBC3 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
DNMT3BQ9UBC3 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
DNMT3BQ9UBC3 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
DNMT3BQ9UBC3 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms