Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCM2LQ9NUG4 HYMAI-201ENST00000635591 3347 ntBASIC16.2■□□□□ 0.18
CCM2LQ9NUG4 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.2■□□□□ 0.18
CCM2LQ9NUG4 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.2■□□□□ 0.18
CCM2LQ9NUG4 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCM2LQ9NUG4 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CCM2LQ9NUG4 TSPY12P-201ENST00000421279 868 ntBASIC16.2■□□□□ 0.18
CCM2LQ9NUG4 AP002383.4-201ENST00000442518 975 ntBASIC16.2■□□□□ 0.18
CCM2LQ9NUG4 NUS1P1-201ENST00000446295 882 ntBASIC16.2■□□□□ 0.18
CCM2LQ9NUG4 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.2■□□□□ 0.18
CCM2LQ9NUG4 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.2■□□□□ 0.18
CCM2LQ9NUG4 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.2■□□□□ 0.18
CCM2LQ9NUG4 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.2■□□□□ 0.18
CCM2LQ9NUG4 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCM2LQ9NUG4 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.2■□□□□ 0.18
CCM2LQ9NUG4 AP002414.4-201ENST00000589764 1148 ntBASIC16.2■□□□□ 0.18
CCM2LQ9NUG4 AL031008.1-201ENST00000619963 541 ntBASIC16.2■□□□□ 0.18
CCM2LQ9NUG4 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.2■□□□□ 0.18
CCM2LQ9NUG4 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.2■□□□□ 0.18
CCM2LQ9NUG4 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCM2LQ9NUG4 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCM2LQ9NUG4 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.2■□□□□ 0.18
CCM2LQ9NUG4 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CCM2LQ9NUG4 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.2■□□□□ 0.18
CCM2LQ9NUG4 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCM2LQ9NUG4 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCM2LQ9NUG4 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCM2LQ9NUG4 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCM2LQ9NUG4 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCM2LQ9NUG4 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCM2LQ9NUG4 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCM2LQ9NUG4 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CCM2LQ9NUG4 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CCM2LQ9NUG4 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCM2LQ9NUG4 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCM2LQ9NUG4 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
CCM2LQ9NUG4 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCM2LQ9NUG4 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CCM2LQ9NUG4 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.19■□□□□ 0.18
CCM2LQ9NUG4 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCM2LQ9NUG4 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCM2LQ9NUG4 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCM2LQ9NUG4 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CCM2LQ9NUG4 COX5BP2-201ENST00000392354 334 ntBASIC16.19■□□□□ 0.18
CCM2LQ9NUG4 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCM2LQ9NUG4 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCM2LQ9NUG4 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.19■□□□□ 0.18
CCM2LQ9NUG4 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
CCM2LQ9NUG4 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.19■□□□□ 0.18
CCM2LQ9NUG4 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCM2LQ9NUG4 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
CCM2LQ9NUG4 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.19■□□□□ 0.18
CCM2LQ9NUG4 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCM2LQ9NUG4 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCM2LQ9NUG4 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.19■□□□□ 0.18
CCM2LQ9NUG4 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCM2LQ9NUG4 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CCM2LQ9NUG4 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.19■□□□□ 0.18
CCM2LQ9NUG4 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.19■□□□□ 0.18
CCM2LQ9NUG4 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCM2LQ9NUG4 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.19■□□□□ 0.18
CCM2LQ9NUG4 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCM2LQ9NUG4 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCM2LQ9NUG4 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCM2LQ9NUG4 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCM2LQ9NUG4 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCM2LQ9NUG4 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCM2LQ9NUG4 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCM2LQ9NUG4 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCM2LQ9NUG4 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCM2LQ9NUG4 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCM2LQ9NUG4 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCM2LQ9NUG4 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
CCM2LQ9NUG4 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.18■□□□□ 0.18
CCM2LQ9NUG4 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCM2LQ9NUG4 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCM2LQ9NUG4 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.18■□□□□ 0.18
CCM2LQ9NUG4 MTHFR-217ENST00000641820 1569 ntBASIC16.18■□□□□ 0.18
CCM2LQ9NUG4 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCM2LQ9NUG4 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCM2LQ9NUG4 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCM2LQ9NUG4 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CCM2LQ9NUG4 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CCM2LQ9NUG4 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCM2LQ9NUG4 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCM2LQ9NUG4 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CCM2LQ9NUG4 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCM2LQ9NUG4 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCM2LQ9NUG4 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.18■□□□□ 0.18
CCM2LQ9NUG4 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.18■□□□□ 0.18
CCM2LQ9NUG4 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.18■□□□□ 0.18
CCM2LQ9NUG4 AC079776.4-201ENST00000511039 504 ntBASIC16.18■□□□□ 0.18
CCM2LQ9NUG4 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCM2LQ9NUG4 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCM2LQ9NUG4 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.18■□□□□ 0.18
CCM2LQ9NUG4 AL732292.2-201ENST00000609649 430 ntBASIC16.18■□□□□ 0.18
CCM2LQ9NUG4 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.18■□□□□ 0.18
CCM2LQ9NUG4 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.18■□□□□ 0.18
CCM2LQ9NUG4 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCM2LQ9NUG4 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms