Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.07■□□□□ 0.48
CISHQ9NSE2 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.07■□□□□ 0.48
CISHQ9NSE2 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.07■□□□□ 0.48
CISHQ9NSE2 HCG4B-203ENST00000450128 991 ntBASIC18.07■□□□□ 0.48
CISHQ9NSE2 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CISHQ9NSE2 AC106730.1-201ENST00000566722 1090 ntBASIC18.07■□□□□ 0.48
CISHQ9NSE2 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.07■□□□□ 0.48
CISHQ9NSE2 MPDU1-223ENST00000582151 728 ntBASIC18.07■□□□□ 0.48
CISHQ9NSE2 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CISHQ9NSE2 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.07■□□□□ 0.48
CISHQ9NSE2 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CISHQ9NSE2 AC011676.5-201ENST00000624864 2660 ntBASIC18.07■□□□□ 0.48
CISHQ9NSE2 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
CISHQ9NSE2 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CISHQ9NSE2 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CISHQ9NSE2 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CISHQ9NSE2 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CISHQ9NSE2 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CISHQ9NSE2 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CISHQ9NSE2 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CISHQ9NSE2 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CISHQ9NSE2 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CISHQ9NSE2 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CISHQ9NSE2 ZNF259P1-201ENST00000407656 1365 ntBASIC18.06■□□□□ 0.48
CISHQ9NSE2 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CISHQ9NSE2 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CISHQ9NSE2 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.06■□□□□ 0.48
CISHQ9NSE2 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.06■□□□□ 0.48
CISHQ9NSE2 AL391256.1-201ENST00000443260 1855 ntBASIC18.06■□□□□ 0.48
CISHQ9NSE2 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CISHQ9NSE2 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CISHQ9NSE2 AGGF1P2-201ENST00000426656 2106 ntBASIC18.06■□□□□ 0.48
CISHQ9NSE2 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.06■□□□□ 0.48
CISHQ9NSE2 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.06■□□□□ 0.48
CISHQ9NSE2 FAM185BP-201ENST00000443595 716 ntBASIC18.06■□□□□ 0.48
CISHQ9NSE2 AP002490.2-201ENST00000524791 560 ntBASIC18.06■□□□□ 0.48
CISHQ9NSE2 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC18.06■□□□□ 0.48
CISHQ9NSE2 ACTL9-202ENST00000612068 1252 ntBASIC18.06■□□□□ 0.48
CISHQ9NSE2 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CISHQ9NSE2 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CISHQ9NSE2 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.06■□□□□ 0.48
CISHQ9NSE2 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC18.06■□□□□ 0.48
CISHQ9NSE2 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.06■□□□□ 0.48
CISHQ9NSE2 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.06■□□□□ 0.48
CISHQ9NSE2 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
CISHQ9NSE2 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CISHQ9NSE2 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.06■□□□□ 0.48
CISHQ9NSE2 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CISHQ9NSE2 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.06■□□□□ 0.48
CISHQ9NSE2 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.06■□□□□ 0.48
CISHQ9NSE2 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CISHQ9NSE2 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CISHQ9NSE2 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CISHQ9NSE2 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CISHQ9NSE2 SLC22A20-204ENST00000530038 1673 ntBASIC18.06■□□□□ 0.48
CISHQ9NSE2 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CISHQ9NSE2 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CISHQ9NSE2 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CISHQ9NSE2 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CISHQ9NSE2 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CISHQ9NSE2 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.05■□□□□ 0.48
CISHQ9NSE2 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CISHQ9NSE2 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.05■□□□□ 0.48
CISHQ9NSE2 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CISHQ9NSE2 LINC00895-201ENST00000629028 1637 ntBASIC18.05■□□□□ 0.48
CISHQ9NSE2 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CISHQ9NSE2 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.05■□□□□ 0.48
CISHQ9NSE2 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CISHQ9NSE2 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CISHQ9NSE2 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.05■□□□□ 0.48
CISHQ9NSE2 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.05■□□□□ 0.48
CISHQ9NSE2 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CISHQ9NSE2 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC18.05■□□□□ 0.48
CISHQ9NSE2 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CISHQ9NSE2 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
CISHQ9NSE2 PMS2P1-201ENST00000431037 1228 ntBASIC18.05■□□□□ 0.48
CISHQ9NSE2 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.05■□□□□ 0.48
CISHQ9NSE2 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.05■□□□□ 0.48
CISHQ9NSE2 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.05■□□□□ 0.48
CISHQ9NSE2 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.05■□□□□ 0.48
CISHQ9NSE2 CXCL1P1-201ENST00000502804 216 ntBASIC18.05■□□□□ 0.48
CISHQ9NSE2 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.05■□□□□ 0.48
CISHQ9NSE2 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CISHQ9NSE2 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.05■□□□□ 0.48
CISHQ9NSE2 AC091167.2-201ENST00000579581 588 ntBASIC18.05■□□□□ 0.48
CISHQ9NSE2 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC18.05■□□□□ 0.48
CISHQ9NSE2 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CISHQ9NSE2 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.05■□□□□ 0.48
CISHQ9NSE2 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC18.05■□□□□ 0.48
CISHQ9NSE2 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CISHQ9NSE2 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
CISHQ9NSE2 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CISHQ9NSE2 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CISHQ9NSE2 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CISHQ9NSE2 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CISHQ9NSE2 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CISHQ9NSE2 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CISHQ9NSE2 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CISHQ9NSE2 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CISHQ9NSE2 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms