Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
CDC42SE2Q9NRR3 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CDC42SE2Q9NRR3 AL021920.2-201ENST00000624828 1351 ntBASIC11.72□□□□□ -0.53
CDC42SE2Q9NRR3 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
CDC42SE2Q9NRR3 CCS-201ENST00000310190 942 ntTSL 5 BASIC11.72□□□□□ -0.53
CDC42SE2Q9NRR3 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CDC42SE2Q9NRR3 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC11.72□□□□□ -0.53
CDC42SE2Q9NRR3 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CDC42SE2Q9NRR3 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
CDC42SE2Q9NRR3 ACTG1P4-201ENST00000425123 1122 ntBASIC11.72□□□□□ -0.53
CDC42SE2Q9NRR3 AC104076.2-201ENST00000448912 469 ntBASIC11.72□□□□□ -0.53
CDC42SE2Q9NRR3 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC11.72□□□□□ -0.53
CDC42SE2Q9NRR3 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
CDC42SE2Q9NRR3 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
CDC42SE2Q9NRR3 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CDC42SE2Q9NRR3 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
CDC42SE2Q9NRR3 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC11.72□□□□□ -0.53
CDC42SE2Q9NRR3 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CDC42SE2Q9NRR3 ABR-203ENST00000536794 2213 ntTSL 2 BASIC11.72□□□□□ -0.53
CDC42SE2Q9NRR3 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CDC42SE2Q9NRR3 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CDC42SE2Q9NRR3 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
CDC42SE2Q9NRR3 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
CDC42SE2Q9NRR3 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC11.72□□□□□ -0.53
CDC42SE2Q9NRR3 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
CDC42SE2Q9NRR3 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
CDC42SE2Q9NRR3 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC11.72□□□□□ -0.53
CDC42SE2Q9NRR3 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CDC42SE2Q9NRR3 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
CDC42SE2Q9NRR3 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CDC42SE2Q9NRR3 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CDC42SE2Q9NRR3 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
CDC42SE2Q9NRR3 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
CDC42SE2Q9NRR3 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CDC42SE2Q9NRR3 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
CDC42SE2Q9NRR3 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
CDC42SE2Q9NRR3 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CDC42SE2Q9NRR3 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CDC42SE2Q9NRR3 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
CDC42SE2Q9NRR3 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
CDC42SE2Q9NRR3 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CDC42SE2Q9NRR3 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC11.71□□□□□ -0.53
CDC42SE2Q9NRR3 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC11.71□□□□□ -0.53
CDC42SE2Q9NRR3 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CDC42SE2Q9NRR3 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC11.71□□□□□ -0.53
CDC42SE2Q9NRR3 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CDC42SE2Q9NRR3 AC008894.3-201ENST00000624324 3103 ntBASIC11.71□□□□□ -0.53
CDC42SE2Q9NRR3 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CDC42SE2Q9NRR3 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CDC42SE2Q9NRR3 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC11.71□□□□□ -0.53
CDC42SE2Q9NRR3 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CDC42SE2Q9NRR3 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC11.71□□□□□ -0.53
CDC42SE2Q9NRR3 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC11.71□□□□□ -0.53
CDC42SE2Q9NRR3 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC11.71□□□□□ -0.53
CDC42SE2Q9NRR3 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CDC42SE2Q9NRR3 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CDC42SE2Q9NRR3 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CDC42SE2Q9NRR3 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC11.71□□□□□ -0.53
CDC42SE2Q9NRR3 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
CDC42SE2Q9NRR3 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CDC42SE2Q9NRR3 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CDC42SE2Q9NRR3 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CDC42SE2Q9NRR3 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC11.71□□□□□ -0.53
CDC42SE2Q9NRR3 SIGLEC30P-201ENST00000455569 941 ntBASIC11.71□□□□□ -0.53
CDC42SE2Q9NRR3 HLA-J-202ENST00000469281 1241 ntBASIC11.71□□□□□ -0.53
CDC42SE2Q9NRR3 AC022616.7-201ENST00000525383 220 ntBASIC11.71□□□□□ -0.53
CDC42SE2Q9NRR3 ABR-204ENST00000543210 1049 ntTSL 2 BASIC11.71□□□□□ -0.53
CDC42SE2Q9NRR3 AL136038.3-201ENST00000561909 1096 ntBASIC11.71□□□□□ -0.53
CDC42SE2Q9NRR3 ABR-217ENST00000572441 563 ntTSL 4 BASIC11.71□□□□□ -0.53
CDC42SE2Q9NRR3 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC11.71□□□□□ -0.53
CDC42SE2Q9NRR3 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC11.71□□□□□ -0.53
CDC42SE2Q9NRR3 NDUFV2-AS1-203ENST00000608008 779 ntBASIC11.71□□□□□ -0.53
CDC42SE2Q9NRR3 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC11.71□□□□□ -0.53
CDC42SE2Q9NRR3 AC066615.1-201ENST00000640911 628 ntBASIC11.71□□□□□ -0.53
CDC42SE2Q9NRR3 AMT-206ENST00000458307 1860 ntTSL 2 BASIC11.71□□□□□ -0.53
CDC42SE2Q9NRR3 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC11.71□□□□□ -0.53
CDC42SE2Q9NRR3 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
CDC42SE2Q9NRR3 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CDC42SE2Q9NRR3 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
CDC42SE2Q9NRR3 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CDC42SE2Q9NRR3 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
CDC42SE2Q9NRR3 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CDC42SE2Q9NRR3 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CDC42SE2Q9NRR3 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC11.71□□□□□ -0.54
CDC42SE2Q9NRR3 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
CDC42SE2Q9NRR3 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
CDC42SE2Q9NRR3 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC11.71□□□□□ -0.54
CDC42SE2Q9NRR3 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
CDC42SE2Q9NRR3 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CDC42SE2Q9NRR3 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
CDC42SE2Q9NRR3 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CDC42SE2Q9NRR3 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CDC42SE2Q9NRR3 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.54
CDC42SE2Q9NRR3 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC11.71□□□□□ -0.54
CDC42SE2Q9NRR3 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC11.7□□□□□ -0.54
CDC42SE2Q9NRR3 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
CDC42SE2Q9NRR3 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
CDC42SE2Q9NRR3 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC11.7□□□□□ -0.54
CDC42SE2Q9NRR3 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC11.7□□□□□ -0.54
CDC42SE2Q9NRR3 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms