Protein–RNA interactions for Protein: Q9NPJ1

MKKS, McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin, humanhuman

Predicted RBP Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKKSQ9NPJ1 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MKKSQ9NPJ1 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
MKKSQ9NPJ1 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
MKKSQ9NPJ1 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
MKKSQ9NPJ1 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.06■□□□□ 0.16
MKKSQ9NPJ1 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
MKKSQ9NPJ1 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
MKKSQ9NPJ1 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
MKKSQ9NPJ1 YBX2P1-201ENST00000394192 760 ntBASIC16.06■□□□□ 0.16
MKKSQ9NPJ1 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MKKSQ9NPJ1 FAM185BP-201ENST00000443595 716 ntBASIC16.06■□□□□ 0.16
MKKSQ9NPJ1 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
MKKSQ9NPJ1 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.06■□□□□ 0.16
MKKSQ9NPJ1 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.06■□□□□ 0.16
MKKSQ9NPJ1 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.06■□□□□ 0.16
MKKSQ9NPJ1 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.06■□□□□ 0.16
MKKSQ9NPJ1 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.06■□□□□ 0.16
MKKSQ9NPJ1 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.06■□□□□ 0.16
MKKSQ9NPJ1 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MKKSQ9NPJ1 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
MKKSQ9NPJ1 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
MKKSQ9NPJ1 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
MKKSQ9NPJ1 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
MKKSQ9NPJ1 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.06■□□□□ 0.16
MKKSQ9NPJ1 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
MKKSQ9NPJ1 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MKKSQ9NPJ1 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
MKKSQ9NPJ1 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MKKSQ9NPJ1 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
MKKSQ9NPJ1 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MKKSQ9NPJ1 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MKKSQ9NPJ1 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MKKSQ9NPJ1 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
MKKSQ9NPJ1 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
MKKSQ9NPJ1 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MKKSQ9NPJ1 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.05■□□□□ 0.16
MKKSQ9NPJ1 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MKKSQ9NPJ1 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MKKSQ9NPJ1 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MKKSQ9NPJ1 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MKKSQ9NPJ1 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
MKKSQ9NPJ1 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MKKSQ9NPJ1 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MKKSQ9NPJ1 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.05■□□□□ 0.16
MKKSQ9NPJ1 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.05■□□□□ 0.16
MKKSQ9NPJ1 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.05■□□□□ 0.16
MKKSQ9NPJ1 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.05■□□□□ 0.16
MKKSQ9NPJ1 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.05■□□□□ 0.16
MKKSQ9NPJ1 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.05■□□□□ 0.16
MKKSQ9NPJ1 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.05■□□□□ 0.16
MKKSQ9NPJ1 MIR3687-2-201ENST00000577708 61 ntBASIC16.05■□□□□ 0.16
MKKSQ9NPJ1 AC023141.13-201ENST00000604991 943 ntBASIC16.05■□□□□ 0.16
MKKSQ9NPJ1 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.05■□□□□ 0.16
MKKSQ9NPJ1 MIR3687-1-201ENST00000614492 61 ntBASIC16.05■□□□□ 0.16
MKKSQ9NPJ1 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.05■□□□□ 0.16
MKKSQ9NPJ1 AC004877.2-201ENST00000623941 599 ntBASIC16.05■□□□□ 0.16
MKKSQ9NPJ1 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MKKSQ9NPJ1 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MKKSQ9NPJ1 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MKKSQ9NPJ1 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MKKSQ9NPJ1 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.05■□□□□ 0.16
MKKSQ9NPJ1 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
MKKSQ9NPJ1 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
MKKSQ9NPJ1 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MKKSQ9NPJ1 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
MKKSQ9NPJ1 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MKKSQ9NPJ1 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.04■□□□□ 0.16
MKKSQ9NPJ1 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.04■□□□□ 0.16
MKKSQ9NPJ1 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.04■□□□□ 0.16
MKKSQ9NPJ1 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.04■□□□□ 0.16
MKKSQ9NPJ1 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
MKKSQ9NPJ1 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MKKSQ9NPJ1 BCAR1-209ENST00000546196 1340 ntBASIC16.04■□□□□ 0.16
MKKSQ9NPJ1 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MKKSQ9NPJ1 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
MKKSQ9NPJ1 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
MKKSQ9NPJ1 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MKKSQ9NPJ1 MCCD1P2-201ENST00000423228 335 ntBASIC16.04■□□□□ 0.16
MKKSQ9NPJ1 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.04■□□□□ 0.16
MKKSQ9NPJ1 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
MKKSQ9NPJ1 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.04■□□□□ 0.16
MKKSQ9NPJ1 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.04■□□□□ 0.16
MKKSQ9NPJ1 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.04■□□□□ 0.16
MKKSQ9NPJ1 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MKKSQ9NPJ1 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
MKKSQ9NPJ1 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MKKSQ9NPJ1 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.04■□□□□ 0.16
MKKSQ9NPJ1 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
MKKSQ9NPJ1 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.04■□□□□ 0.16
MKKSQ9NPJ1 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MKKSQ9NPJ1 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
MKKSQ9NPJ1 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MKKSQ9NPJ1 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.04■□□□□ 0.16
MKKSQ9NPJ1 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.04■□□□□ 0.16
MKKSQ9NPJ1 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.04■□□□□ 0.16
MKKSQ9NPJ1 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
MKKSQ9NPJ1 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
MKKSQ9NPJ1 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MKKSQ9NPJ1 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MKKSQ9NPJ1 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms