Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CHD8Q9HCK8 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CHD8Q9HCK8 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CHD8Q9HCK8 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CHD8Q9HCK8 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC15.52■□□□□ 0.08
CHD8Q9HCK8 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CHD8Q9HCK8 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC15.52■□□□□ 0.07
CHD8Q9HCK8 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.52■□□□□ 0.07
CHD8Q9HCK8 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CHD8Q9HCK8 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
CHD8Q9HCK8 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
CHD8Q9HCK8 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.52■□□□□ 0.07
CHD8Q9HCK8 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.52■□□□□ 0.07
CHD8Q9HCK8 AC104784.1-201ENST00000473096 294 ntBASIC15.52■□□□□ 0.07
CHD8Q9HCK8 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC15.52■□□□□ 0.07
CHD8Q9HCK8 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CHD8Q9HCK8 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CHD8Q9HCK8 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CHD8Q9HCK8 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
CHD8Q9HCK8 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC15.51■□□□□ 0.07
CHD8Q9HCK8 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC15.51■□□□□ 0.07
CHD8Q9HCK8 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHD8Q9HCK8 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CHD8Q9HCK8 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.51■□□□□ 0.07
CHD8Q9HCK8 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.51■□□□□ 0.07
CHD8Q9HCK8 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.51■□□□□ 0.07
CHD8Q9HCK8 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.51■□□□□ 0.07
CHD8Q9HCK8 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC15.51■□□□□ 0.07
CHD8Q9HCK8 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
CHD8Q9HCK8 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.51■□□□□ 0.07
CHD8Q9HCK8 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.51■□□□□ 0.07
CHD8Q9HCK8 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC15.51■□□□□ 0.07
CHD8Q9HCK8 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHD8Q9HCK8 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC15.51■□□□□ 0.07
CHD8Q9HCK8 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CHD8Q9HCK8 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CHD8Q9HCK8 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHD8Q9HCK8 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC15.51■□□□□ 0.07
CHD8Q9HCK8 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHD8Q9HCK8 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CHD8Q9HCK8 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHD8Q9HCK8 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHD8Q9HCK8 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CHD8Q9HCK8 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHD8Q9HCK8 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHD8Q9HCK8 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.51■□□□□ 0.07
CHD8Q9HCK8 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHD8Q9HCK8 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.51■□□□□ 0.07
CHD8Q9HCK8 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CHD8Q9HCK8 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.51■□□□□ 0.07
CHD8Q9HCK8 TDH-203ENST00000531764 1110 ntBASIC15.51■□□□□ 0.07
CHD8Q9HCK8 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC15.51■□□□□ 0.07
CHD8Q9HCK8 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC15.51■□□□□ 0.07
CHD8Q9HCK8 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHD8Q9HCK8 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHD8Q9HCK8 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.51■□□□□ 0.07
CHD8Q9HCK8 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHD8Q9HCK8 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHD8Q9HCK8 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.51■□□□□ 0.07
CHD8Q9HCK8 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
CHD8Q9HCK8 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHD8Q9HCK8 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC15.51■□□□□ 0.07
CHD8Q9HCK8 BID-204ENST00000399767 2129 ntTSL 2 BASIC15.51■□□□□ 0.07
CHD8Q9HCK8 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CHD8Q9HCK8 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
CHD8Q9HCK8 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC15.51■□□□□ 0.07
CHD8Q9HCK8 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHD8Q9HCK8 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHD8Q9HCK8 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CHD8Q9HCK8 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHD8Q9HCK8 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC15.5■□□□□ 0.07
CHD8Q9HCK8 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.5■□□□□ 0.07
CHD8Q9HCK8 ADM-202ENST00000524948 584 ntTSL 2 BASIC15.5■□□□□ 0.07
CHD8Q9HCK8 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHD8Q9HCK8 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.5■□□□□ 0.07
CHD8Q9HCK8 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHD8Q9HCK8 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.5■□□□□ 0.07
CHD8Q9HCK8 KRT8P22-201ENST00000562317 1415 ntBASIC15.5■□□□□ 0.07
CHD8Q9HCK8 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
CHD8Q9HCK8 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CHD8Q9HCK8 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHD8Q9HCK8 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CHD8Q9HCK8 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
CHD8Q9HCK8 AC073439.1-201ENST00000624121 1774 ntBASIC15.5■□□□□ 0.07
CHD8Q9HCK8 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHD8Q9HCK8 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC15.5■□□□□ 0.07
CHD8Q9HCK8 MIR326-201ENST00000362220 95 ntBASIC15.5■□□□□ 0.07
CHD8Q9HCK8 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHD8Q9HCK8 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC15.5■□□□□ 0.07
CHD8Q9HCK8 SERF2-206ENST00000409291 807 ntTSL 3 BASIC15.5■□□□□ 0.07
CHD8Q9HCK8 AC005077.2-201ENST00000449786 690 ntBASIC15.5■□□□□ 0.07
CHD8Q9HCK8 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.5■□□□□ 0.07
CHD8Q9HCK8 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC15.5■□□□□ 0.07
CHD8Q9HCK8 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC15.5■□□□□ 0.07
CHD8Q9HCK8 KC6-205ENST00000599934 556 ntTSL 4 BASIC15.5■□□□□ 0.07
CHD8Q9HCK8 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC15.5■□□□□ 0.07
CHD8Q9HCK8 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.5■□□□□ 0.07
CHD8Q9HCK8 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CHD8Q9HCK8 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHD8Q9HCK8 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms