Protein–RNA interactions for Protein: Q9H239

MMP28, Matrix metalloproteinase-28, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28Q9H239 MIR3180-4-201ENST00000582223 153 ntBASIC15.05■□□□□ -0
MMP28Q9H239 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC15.05■□□□□ -0
MMP28Q9H239 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC15.05■□□□□ -0
MMP28Q9H239 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC15.05■□□□□ -0
MMP28Q9H239 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
MMP28Q9H239 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
MMP28Q9H239 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC15.05■□□□□ -0
MMP28Q9H239 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
MMP28Q9H239 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
MMP28Q9H239 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.05■□□□□ -0
MMP28Q9H239 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.05■□□□□ -0
MMP28Q9H239 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.05■□□□□ -0
MMP28Q9H239 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
MMP28Q9H239 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
MMP28Q9H239 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
MMP28Q9H239 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.05■□□□□ -0
MMP28Q9H239 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
MMP28Q9H239 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
MMP28Q9H239 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.05■□□□□ -0
MMP28Q9H239 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.05■□□□□ -0
MMP28Q9H239 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
MMP28Q9H239 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
MMP28Q9H239 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
MMP28Q9H239 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
MMP28Q9H239 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MMP28Q9H239 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MMP28Q9H239 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MMP28Q9H239 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
MMP28Q9H239 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MMP28Q9H239 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.04■□□□□ -0
MMP28Q9H239 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MMP28Q9H239 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MMP28Q9H239 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
MMP28Q9H239 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC15.04■□□□□ -0
MMP28Q9H239 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC15.04■□□□□ -0
MMP28Q9H239 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC15.04■□□□□ -0
MMP28Q9H239 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC15.04■□□□□ -0
MMP28Q9H239 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC15.04■□□□□ -0
MMP28Q9H239 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC15.04■□□□□ -0
MMP28Q9H239 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
MMP28Q9H239 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
MMP28Q9H239 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC15.04■□□□□ -0
MMP28Q9H239 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
MMP28Q9H239 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MMP28Q9H239 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
MMP28Q9H239 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC15.04■□□□□ -0
MMP28Q9H239 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC15.04■□□□□ -0
MMP28Q9H239 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MMP28Q9H239 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
MMP28Q9H239 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC15.04■□□□□ -0
MMP28Q9H239 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC15.04■□□□□ -0
MMP28Q9H239 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC15.04■□□□□ -0
MMP28Q9H239 AC024243.1-201ENST00000609234 778 ntBASIC15.04■□□□□ -0
MMP28Q9H239 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
MMP28Q9H239 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
MMP28Q9H239 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.04■□□□□ -0
MMP28Q9H239 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
MMP28Q9H239 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
MMP28Q9H239 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.04■□□□□ -0
MMP28Q9H239 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
MMP28Q9H239 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
MMP28Q9H239 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MMP28Q9H239 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
MMP28Q9H239 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
MMP28Q9H239 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
MMP28Q9H239 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
MMP28Q9H239 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.03■□□□□ -0
MMP28Q9H239 NORAD-201ENST00000565493 5339 ntBASIC15.03■□□□□ -0
MMP28Q9H239 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
MMP28Q9H239 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.03■□□□□ -0
MMP28Q9H239 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.03■□□□□ -0
MMP28Q9H239 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
MMP28Q9H239 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.03■□□□□ -0
MMP28Q9H239 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.03■□□□□ -0
MMP28Q9H239 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.03■□□□□ -0
MMP28Q9H239 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.03■□□□□ -0
MMP28Q9H239 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC15.03■□□□□ -0
MMP28Q9H239 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
MMP28Q9H239 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC15.03■□□□□ -0
MMP28Q9H239 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
MMP28Q9H239 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
MMP28Q9H239 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC15.03■□□□□ -0
MMP28Q9H239 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC15.03■□□□□ -0
MMP28Q9H239 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC15.03■□□□□ -0
MMP28Q9H239 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
MMP28Q9H239 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC15.03■□□□□ -0
MMP28Q9H239 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC15.03■□□□□ -0
MMP28Q9H239 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC15.03■□□□□ -0
MMP28Q9H239 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC15.03■□□□□ -0
MMP28Q9H239 ETFA-216ENST00000560726 942 ntTSL 3 BASIC15.03■□□□□ -0
MMP28Q9H239 AC006011.2-201ENST00000621313 1158 ntBASIC15.03■□□□□ -0
MMP28Q9H239 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC15.03■□□□□ -0
MMP28Q9H239 AL031432.5-201ENST00000641059 760 ntBASIC15.03■□□□□ -0
MMP28Q9H239 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
MMP28Q9H239 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
MMP28Q9H239 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
MMP28Q9H239 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.03■□□□□ -0
MMP28Q9H239 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.03■□□□□ -0
MMP28Q9H239 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
MMP28Q9H239 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms