Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.42■□□□□ 0.22
SLC38A3Q99624 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.42■□□□□ 0.22
SLC38A3Q99624 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
SLC38A3Q99624 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.42■□□□□ 0.22
SLC38A3Q99624 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.42■□□□□ 0.22
SLC38A3Q99624 AC012313.1-201ENST00000593393 3059 ntBASIC16.42■□□□□ 0.22
SLC38A3Q99624 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
SLC38A3Q99624 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
SLC38A3Q99624 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.42■□□□□ 0.22
SLC38A3Q99624 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
SLC38A3Q99624 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.42■□□□□ 0.22
SLC38A3Q99624 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
SLC38A3Q99624 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC38A3Q99624 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SLC38A3Q99624 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
SLC38A3Q99624 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
SLC38A3Q99624 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.42■□□□□ 0.22
SLC38A3Q99624 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.42■□□□□ 0.22
SLC38A3Q99624 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SLC38A3Q99624 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
SLC38A3Q99624 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC38A3Q99624 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.41■□□□□ 0.22
SLC38A3Q99624 AC012569.1-201ENST00000591191 1524 ntBASIC16.41■□□□□ 0.22
SLC38A3Q99624 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC38A3Q99624 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC38A3Q99624 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC38A3Q99624 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SLC38A3Q99624 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.41■□□□□ 0.22
SLC38A3Q99624 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC38A3Q99624 AC140658.5-201ENST00000438532 169 ntBASIC16.41■□□□□ 0.22
SLC38A3Q99624 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.41■□□□□ 0.22
SLC38A3Q99624 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.41■□□□□ 0.22
SLC38A3Q99624 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.41■□□□□ 0.22
SLC38A3Q99624 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC38A3Q99624 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.41■□□□□ 0.22
SLC38A3Q99624 AC004835.2-201ENST00000603762 682 ntBASIC16.41■□□□□ 0.22
SLC38A3Q99624 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC38A3Q99624 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC38A3Q99624 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.41■□□□□ 0.22
SLC38A3Q99624 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC38A3Q99624 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SLC38A3Q99624 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC38A3Q99624 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SLC38A3Q99624 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
SLC38A3Q99624 AL353732.1-201ENST00000569618 1459 ntBASIC16.41■□□□□ 0.22
SLC38A3Q99624 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.41■□□□□ 0.22
SLC38A3Q99624 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SLC38A3Q99624 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
SLC38A3Q99624 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC38A3Q99624 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC38A3Q99624 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC38A3Q99624 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SLC38A3Q99624 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC38A3Q99624 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC38A3Q99624 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.4■□□□□ 0.22
SLC38A3Q99624 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
SLC38A3Q99624 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.4■□□□□ 0.22
SLC38A3Q99624 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC38A3Q99624 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.4■□□□□ 0.22
SLC38A3Q99624 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC38A3Q99624 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC38A3Q99624 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC38A3Q99624 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SLC38A3Q99624 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.4■□□□□ 0.22
SLC38A3Q99624 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.4■□□□□ 0.22
SLC38A3Q99624 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SLC38A3Q99624 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.4■□□□□ 0.22
SLC38A3Q99624 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC38A3Q99624 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.4■□□□□ 0.22
SLC38A3Q99624 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.4■□□□□ 0.22
SLC38A3Q99624 AC027796.2-201ENST00000575326 344 ntBASIC16.4■□□□□ 0.22
SLC38A3Q99624 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.4■□□□□ 0.22
SLC38A3Q99624 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SLC38A3Q99624 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC38A3Q99624 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.4■□□□□ 0.22
SLC38A3Q99624 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
SLC38A3Q99624 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC38A3Q99624 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC38A3Q99624 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SLC38A3Q99624 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC38A3Q99624 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SLC38A3Q99624 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.4■□□□□ 0.22
SLC38A3Q99624 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SLC38A3Q99624 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC38A3Q99624 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC38A3Q99624 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC38A3Q99624 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.4■□□□□ 0.22
SLC38A3Q99624 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC38A3Q99624 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.4■□□□□ 0.22
SLC38A3Q99624 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SLC38A3Q99624 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC38A3Q99624 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC38A3Q99624 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.39■□□□□ 0.22
SLC38A3Q99624 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
SLC38A3Q99624 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC38A3Q99624 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.39■□□□□ 0.21
SLC38A3Q99624 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC38A3Q99624 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
SLC38A3Q99624 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SLC38A3Q99624 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms