Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
MUC4Q99102 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
MUC4Q99102 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
MUC4Q99102 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
MUC4Q99102 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
MUC4Q99102 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
MUC4Q99102 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
MUC4Q99102 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC12.43□□□□□ -0.42
MUC4Q99102 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
MUC4Q99102 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
MUC4Q99102 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
MUC4Q99102 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
MUC4Q99102 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
MUC4Q99102 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
MUC4Q99102 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
MUC4Q99102 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
MUC4Q99102 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC12.42□□□□□ -0.42
MUC4Q99102 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC12.42□□□□□ -0.42
MUC4Q99102 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
MUC4Q99102 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
MUC4Q99102 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
MUC4Q99102 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
MUC4Q99102 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
MUC4Q99102 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC12.42□□□□□ -0.42
MUC4Q99102 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
MUC4Q99102 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
MUC4Q99102 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
MUC4Q99102 AC106795.1-205ENST00000512851 1056 ntBASIC12.42□□□□□ -0.42
MUC4Q99102 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC12.42□□□□□ -0.42
MUC4Q99102 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
MUC4Q99102 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
MUC4Q99102 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
MUC4Q99102 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC12.42□□□□□ -0.42
MUC4Q99102 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
MUC4Q99102 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
MUC4Q99102 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
MUC4Q99102 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
MUC4Q99102 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
MUC4Q99102 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
MUC4Q99102 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
MUC4Q99102 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
MUC4Q99102 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC12.42□□□□□ -0.42
MUC4Q99102 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
MUC4Q99102 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC12.42□□□□□ -0.42
MUC4Q99102 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
MUC4Q99102 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
MUC4Q99102 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
MUC4Q99102 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
MUC4Q99102 MRPL3P1-201ENST00000400109 1033 ntBASIC12.42□□□□□ -0.42
MUC4Q99102 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
MUC4Q99102 COX10-202ENST00000429152 875 ntTSL 2 BASIC12.42□□□□□ -0.42
MUC4Q99102 TSSC2-201ENST00000450217 709 ntBASIC12.42□□□□□ -0.42
MUC4Q99102 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC12.42□□□□□ -0.42
MUC4Q99102 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
MUC4Q99102 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC12.42□□□□□ -0.42
MUC4Q99102 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC12.42□□□□□ -0.42
MUC4Q99102 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
MUC4Q99102 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
MUC4Q99102 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
MUC4Q99102 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
MUC4Q99102 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
MUC4Q99102 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC12.41□□□□□ -0.42
MUC4Q99102 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
MUC4Q99102 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC12.41□□□□□ -0.42
MUC4Q99102 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC12.41□□□□□ -0.42
MUC4Q99102 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC12.41□□□□□ -0.42
MUC4Q99102 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
MUC4Q99102 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
MUC4Q99102 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
MUC4Q99102 INTS4P1-201ENST00000438455 1935 ntBASIC12.41□□□□□ -0.42
MUC4Q99102 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC12.41□□□□□ -0.42
MUC4Q99102 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
MUC4Q99102 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
MUC4Q99102 AC132872.4-202ENST00000622924 2756 ntBASIC12.41□□□□□ -0.42
MUC4Q99102 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
MUC4Q99102 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
MUC4Q99102 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC12.41□□□□□ -0.42
MUC4Q99102 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
MUC4Q99102 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
MUC4Q99102 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
MUC4Q99102 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
MUC4Q99102 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC12.41□□□□□ -0.42
MUC4Q99102 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
MUC4Q99102 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC12.41□□□□□ -0.42
MUC4Q99102 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC12.41□□□□□ -0.42
MUC4Q99102 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC12.41□□□□□ -0.42
MUC4Q99102 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC12.41□□□□□ -0.42
MUC4Q99102 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
MUC4Q99102 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
MUC4Q99102 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC12.41□□□□□ -0.42
MUC4Q99102 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
MUC4Q99102 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
MUC4Q99102 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC12.41□□□□□ -0.42
MUC4Q99102 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
MUC4Q99102 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
MUC4Q99102 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
MUC4Q99102 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
MUC4Q99102 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC12.41□□□□□ -0.42
MUC4Q99102 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
MUC4Q99102 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms