Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC85AQ96PX6 TOP3BP1-201ENST00000420768 1380 ntBASIC20.98■□□□□ 0.95
CCDC85AQ96PX6 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC20.98■□□□□ 0.95
CCDC85AQ96PX6 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC85AQ96PX6 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC85AQ96PX6 STX3-203ENST00000529177 1571 ntTSL 2 BASIC20.98■□□□□ 0.95
CCDC85AQ96PX6 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC20.98■□□□□ 0.95
CCDC85AQ96PX6 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC20.98■□□□□ 0.95
CCDC85AQ96PX6 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC85AQ96PX6 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC85AQ96PX6 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CCDC85AQ96PX6 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
CCDC85AQ96PX6 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC20.98■□□□□ 0.95
CCDC85AQ96PX6 KRT18P32-201ENST00000424695 1287 ntBASIC20.98■□□□□ 0.95
CCDC85AQ96PX6 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC20.98■□□□□ 0.95
CCDC85AQ96PX6 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC20.98■□□□□ 0.95
CCDC85AQ96PX6 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC20.98■□□□□ 0.95
CCDC85AQ96PX6 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC85AQ96PX6 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC85AQ96PX6 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC20.98■□□□□ 0.95
CCDC85AQ96PX6 AC025678.2-201ENST00000562061 970 ntBASIC20.98■□□□□ 0.95
CCDC85AQ96PX6 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC20.98■□□□□ 0.95
CCDC85AQ96PX6 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC85AQ96PX6 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC85AQ96PX6 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC85AQ96PX6 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
CCDC85AQ96PX6 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CCDC85AQ96PX6 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC20.98■□□□□ 0.95
CCDC85AQ96PX6 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC20.98■□□□□ 0.95
CCDC85AQ96PX6 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC85AQ96PX6 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC20.98■□□□□ 0.95
CCDC85AQ96PX6 LINC00896-202ENST00000609602 2128 ntBASIC20.98■□□□□ 0.95
CCDC85AQ96PX6 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC85AQ96PX6 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC85AQ96PX6 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC20.97■□□□□ 0.95
CCDC85AQ96PX6 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CCDC85AQ96PX6 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC20.97■□□□□ 0.95
CCDC85AQ96PX6 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC85AQ96PX6 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC20.97■□□□□ 0.95
CCDC85AQ96PX6 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC85AQ96PX6 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC85AQ96PX6 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC85AQ96PX6 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CCDC85AQ96PX6 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC85AQ96PX6 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC85AQ96PX6 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC85AQ96PX6 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC85AQ96PX6 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CCDC85AQ96PX6 CD99-202ENST00000381180 530 ntTSL 2 BASIC20.97■□□□□ 0.95
CCDC85AQ96PX6 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC85AQ96PX6 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC85AQ96PX6 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC85AQ96PX6 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CCDC85AQ96PX6 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC85AQ96PX6 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
CCDC85AQ96PX6 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC20.97■□□□□ 0.95
CCDC85AQ96PX6 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC20.97■□□□□ 0.95
CCDC85AQ96PX6 DUX4L27-201ENST00000554796 1261 ntBASIC20.97■□□□□ 0.95
CCDC85AQ96PX6 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CCDC85AQ96PX6 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
CCDC85AQ96PX6 AC005498.2-205ENST00000593218 784 ntBASIC20.97■□□□□ 0.95
CCDC85AQ96PX6 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC20.97■□□□□ 0.95
CCDC85AQ96PX6 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC20.97■□□□□ 0.95
CCDC85AQ96PX6 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC85AQ96PX6 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC20.97■□□□□ 0.95
CCDC85AQ96PX6 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CCDC85AQ96PX6 UXT-AS1-201ENST00000590504 1525 ntBASIC20.97■□□□□ 0.95
CCDC85AQ96PX6 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC85AQ96PX6 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC85AQ96PX6 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC85AQ96PX6 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC85AQ96PX6 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC20.96■□□□□ 0.95
CCDC85AQ96PX6 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC85AQ96PX6 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC85AQ96PX6 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC85AQ96PX6 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
CCDC85AQ96PX6 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC85AQ96PX6 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC20.96■□□□□ 0.95
CCDC85AQ96PX6 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CCDC85AQ96PX6 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC85AQ96PX6 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC20.96■□□□□ 0.95
CCDC85AQ96PX6 VPS29-207ENST00000549970 818 ntTSL 3 BASIC20.96■□□□□ 0.95
CCDC85AQ96PX6 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CCDC85AQ96PX6 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC85AQ96PX6 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC20.96■□□□□ 0.95
CCDC85AQ96PX6 AL031055.1-201ENST00000606362 631 ntBASIC20.96■□□□□ 0.95
CCDC85AQ96PX6 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC20.96■□□□□ 0.95
CCDC85AQ96PX6 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC85AQ96PX6 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC85AQ96PX6 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC85AQ96PX6 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC85AQ96PX6 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC85AQ96PX6 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC85AQ96PX6 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CCDC85AQ96PX6 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC20.96■□□□□ 0.95
CCDC85AQ96PX6 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC20.96■□□□□ 0.95
CCDC85AQ96PX6 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC85AQ96PX6 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC85AQ96PX6 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
CCDC85AQ96PX6 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms