Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
GAFA1Q96PS6 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GAFA1Q96PS6 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GAFA1Q96PS6 AC106886.4-201ENST00000623557 2502 ntBASIC14.1□□□□□ -0.15
GAFA1Q96PS6 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GAFA1Q96PS6 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC14.1□□□□□ -0.15
GAFA1Q96PS6 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
GAFA1Q96PS6 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.1□□□□□ -0.15
GAFA1Q96PS6 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
GAFA1Q96PS6 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC14.1□□□□□ -0.15
GAFA1Q96PS6 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
GAFA1Q96PS6 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.1□□□□□ -0.15
GAFA1Q96PS6 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GAFA1Q96PS6 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
GAFA1Q96PS6 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
GAFA1Q96PS6 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
GAFA1Q96PS6 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.1□□□□□ -0.15
GAFA1Q96PS6 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GAFA1Q96PS6 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
GAFA1Q96PS6 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GAFA1Q96PS6 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC14.1□□□□□ -0.15
GAFA1Q96PS6 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
GAFA1Q96PS6 ZNF259P1-201ENST00000407656 1365 ntBASIC14.09□□□□□ -0.15
GAFA1Q96PS6 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC14.09□□□□□ -0.15
GAFA1Q96PS6 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GAFA1Q96PS6 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GAFA1Q96PS6 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
GAFA1Q96PS6 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.09□□□□□ -0.15
GAFA1Q96PS6 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GAFA1Q96PS6 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GAFA1Q96PS6 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
GAFA1Q96PS6 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC14.09□□□□□ -0.15
GAFA1Q96PS6 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
GAFA1Q96PS6 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
GAFA1Q96PS6 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GAFA1Q96PS6 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GAFA1Q96PS6 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.09□□□□□ -0.15
GAFA1Q96PS6 LBH-204ENST00000406087 559 ntTSL 4 BASIC14.09□□□□□ -0.15
GAFA1Q96PS6 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC14.09□□□□□ -0.15
GAFA1Q96PS6 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC14.09□□□□□ -0.15
GAFA1Q96PS6 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC14.09□□□□□ -0.15
GAFA1Q96PS6 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
GAFA1Q96PS6 AC106730.1-201ENST00000566722 1090 ntBASIC14.09□□□□□ -0.15
GAFA1Q96PS6 MPDU1-223ENST00000582151 728 ntBASIC14.09□□□□□ -0.15
GAFA1Q96PS6 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.09□□□□□ -0.15
GAFA1Q96PS6 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GAFA1Q96PS6 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC14.09□□□□□ -0.15
GAFA1Q96PS6 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC14.09□□□□□ -0.15
GAFA1Q96PS6 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GAFA1Q96PS6 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
GAFA1Q96PS6 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC14.09□□□□□ -0.15
GAFA1Q96PS6 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
GAFA1Q96PS6 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
GAFA1Q96PS6 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.09□□□□□ -0.15
GAFA1Q96PS6 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
GAFA1Q96PS6 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GAFA1Q96PS6 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
GAFA1Q96PS6 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.09□□□□□ -0.15
GAFA1Q96PS6 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GAFA1Q96PS6 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.09□□□□□ -0.15
GAFA1Q96PS6 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GAFA1Q96PS6 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
GAFA1Q96PS6 LINC00895-201ENST00000629028 1637 ntBASIC14.08□□□□□ -0.15
GAFA1Q96PS6 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC14.08□□□□□ -0.15
GAFA1Q96PS6 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
GAFA1Q96PS6 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC14.08□□□□□ -0.16
GAFA1Q96PS6 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
GAFA1Q96PS6 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
GAFA1Q96PS6 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
GAFA1Q96PS6 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
GAFA1Q96PS6 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
GAFA1Q96PS6 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
GAFA1Q96PS6 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
GAFA1Q96PS6 AL353732.1-201ENST00000569618 1459 ntBASIC14.08□□□□□ -0.16
GAFA1Q96PS6 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
GAFA1Q96PS6 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
GAFA1Q96PS6 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC14.08□□□□□ -0.16
GAFA1Q96PS6 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
GAFA1Q96PS6 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
GAFA1Q96PS6 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
GAFA1Q96PS6 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
GAFA1Q96PS6 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
GAFA1Q96PS6 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
GAFA1Q96PS6 PMS2P1-201ENST00000431037 1228 ntBASIC14.08□□□□□ -0.16
GAFA1Q96PS6 AC007967.2-201ENST00000432613 625 ntBASIC14.08□□□□□ -0.16
GAFA1Q96PS6 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.08□□□□□ -0.16
GAFA1Q96PS6 FAM185BP-201ENST00000443595 716 ntBASIC14.08□□□□□ -0.16
GAFA1Q96PS6 CXCL1P1-201ENST00000502804 216 ntBASIC14.08□□□□□ -0.16
GAFA1Q96PS6 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.08□□□□□ -0.16
GAFA1Q96PS6 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC14.08□□□□□ -0.16
GAFA1Q96PS6 AC005412.3-201ENST00000580309 715 ntBASIC14.08□□□□□ -0.16
GAFA1Q96PS6 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC14.08□□□□□ -0.16
GAFA1Q96PS6 AC064836.3-201ENST00000607928 673 ntBASIC14.08□□□□□ -0.16
GAFA1Q96PS6 ACTL9-202ENST00000612068 1252 ntBASIC14.08□□□□□ -0.16
GAFA1Q96PS6 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.08□□□□□ -0.16
GAFA1Q96PS6 AC078925.2-201ENST00000624013 1973 ntBASIC14.08□□□□□ -0.16
GAFA1Q96PS6 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
GAFA1Q96PS6 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.08□□□□□ -0.16
GAFA1Q96PS6 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC14.08□□□□□ -0.16
GAFA1Q96PS6 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms