Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ECHDC3Q96DC8 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ECHDC3Q96DC8 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.91■□□□□ 0.3
ECHDC3Q96DC8 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
ECHDC3Q96DC8 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
ECHDC3Q96DC8 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.9■□□□□ 0.3
ECHDC3Q96DC8 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ECHDC3Q96DC8 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
ECHDC3Q96DC8 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
ECHDC3Q96DC8 OR6D1P-202ENST00000641007 5290 ntBASIC16.9■□□□□ 0.3
ECHDC3Q96DC8 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ECHDC3Q96DC8 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
ECHDC3Q96DC8 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ECHDC3Q96DC8 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ECHDC3Q96DC8 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.9■□□□□ 0.3
ECHDC3Q96DC8 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.9■□□□□ 0.3
ECHDC3Q96DC8 ALG1L5P-201ENST00000482043 771 ntBASIC16.9■□□□□ 0.3
ECHDC3Q96DC8 YBX1P5-201ENST00000509441 847 ntBASIC16.9■□□□□ 0.3
ECHDC3Q96DC8 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.9■□□□□ 0.3
ECHDC3Q96DC8 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.9■□□□□ 0.3
ECHDC3Q96DC8 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.9■□□□□ 0.3
ECHDC3Q96DC8 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
ECHDC3Q96DC8 MIR3909-201ENST00000579518 119 ntBASIC16.9■□□□□ 0.3
ECHDC3Q96DC8 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ECHDC3Q96DC8 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ECHDC3Q96DC8 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
ECHDC3Q96DC8 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.9■□□□□ 0.3
ECHDC3Q96DC8 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ECHDC3Q96DC8 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
ECHDC3Q96DC8 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ECHDC3Q96DC8 AL645728.1-201ENST00000366221 2101 ntBASIC16.9■□□□□ 0.3
ECHDC3Q96DC8 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ECHDC3Q96DC8 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
ECHDC3Q96DC8 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.89■□□□□ 0.3
ECHDC3Q96DC8 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
ECHDC3Q96DC8 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
ECHDC3Q96DC8 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
ECHDC3Q96DC8 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
ECHDC3Q96DC8 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.89■□□□□ 0.3
ECHDC3Q96DC8 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
ECHDC3Q96DC8 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
ECHDC3Q96DC8 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
ECHDC3Q96DC8 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
ECHDC3Q96DC8 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
ECHDC3Q96DC8 FZD10-202ENST00000539839 3282 ntBASIC16.89■□□□□ 0.29
ECHDC3Q96DC8 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
ECHDC3Q96DC8 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ECHDC3Q96DC8 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.89■□□□□ 0.29
ECHDC3Q96DC8 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.89■□□□□ 0.29
ECHDC3Q96DC8 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
ECHDC3Q96DC8 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ECHDC3Q96DC8 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
ECHDC3Q96DC8 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
ECHDC3Q96DC8 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ECHDC3Q96DC8 RNU1-129P-201ENST00000384064 167 ntBASIC16.89■□□□□ 0.29
ECHDC3Q96DC8 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
ECHDC3Q96DC8 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.89■□□□□ 0.29
ECHDC3Q96DC8 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.89■□□□□ 0.29
ECHDC3Q96DC8 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.89■□□□□ 0.29
ECHDC3Q96DC8 AC109635.5-201ENST00000533593 962 ntBASIC16.89■□□□□ 0.29
ECHDC3Q96DC8 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.89■□□□□ 0.29
ECHDC3Q96DC8 U1.21-201ENST00000580816 167 ntBASIC16.89■□□□□ 0.29
ECHDC3Q96DC8 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.89■□□□□ 0.29
ECHDC3Q96DC8 AC091812.2-201ENST00000619081 385 ntBASIC16.89■□□□□ 0.29
ECHDC3Q96DC8 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.89■□□□□ 0.29
ECHDC3Q96DC8 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ECHDC3Q96DC8 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ECHDC3Q96DC8 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
ECHDC3Q96DC8 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ECHDC3Q96DC8 AC105020.1-201ENST00000435356 2205 ntBASIC16.89■□□□□ 0.29
ECHDC3Q96DC8 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
ECHDC3Q96DC8 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ECHDC3Q96DC8 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.89■□□□□ 0.29
ECHDC3Q96DC8 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
ECHDC3Q96DC8 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ECHDC3Q96DC8 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ECHDC3Q96DC8 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
ECHDC3Q96DC8 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ECHDC3Q96DC8 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.88■□□□□ 0.29
ECHDC3Q96DC8 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ECHDC3Q96DC8 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ECHDC3Q96DC8 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ECHDC3Q96DC8 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ECHDC3Q96DC8 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
ECHDC3Q96DC8 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ECHDC3Q96DC8 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ECHDC3Q96DC8 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
ECHDC3Q96DC8 SNX33P1-201ENST00000592116 1762 ntBASIC16.88■□□□□ 0.29
ECHDC3Q96DC8 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ECHDC3Q96DC8 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ECHDC3Q96DC8 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ECHDC3Q96DC8 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ECHDC3Q96DC8 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
ECHDC3Q96DC8 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.88■□□□□ 0.29
ECHDC3Q96DC8 HTR5BP-201ENST00000430851 1154 ntBASIC16.88■□□□□ 0.29
ECHDC3Q96DC8 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.88■□□□□ 0.29
ECHDC3Q96DC8 AC005829.1-201ENST00000570002 483 ntBASIC16.88■□□□□ 0.29
ECHDC3Q96DC8 MIR3687-2-201ENST00000577708 61 ntBASIC16.88■□□□□ 0.29
ECHDC3Q96DC8 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.88■□□□□ 0.29
ECHDC3Q96DC8 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms