Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SH3KBP1Q96B97 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SH3KBP1Q96B97 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SH3KBP1Q96B97 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SH3KBP1Q96B97 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.85■□□□□ 0.29
SH3KBP1Q96B97 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SH3KBP1Q96B97 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SH3KBP1Q96B97 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.85■□□□□ 0.29
SH3KBP1Q96B97 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SH3KBP1Q96B97 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.85■□□□□ 0.29
SH3KBP1Q96B97 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SH3KBP1Q96B97 PRORSD1P-202ENST00000563365 2154 ntBASIC16.85■□□□□ 0.29
SH3KBP1Q96B97 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SH3KBP1Q96B97 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SH3KBP1Q96B97 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SH3KBP1Q96B97 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SH3KBP1Q96B97 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SH3KBP1Q96B97 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
SH3KBP1Q96B97 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SH3KBP1Q96B97 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SH3KBP1Q96B97 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
SH3KBP1Q96B97 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SH3KBP1Q96B97 LINC00982-205ENST00000420957 435 ntBASIC16.85■□□□□ 0.29
SH3KBP1Q96B97 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SH3KBP1Q96B97 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.85■□□□□ 0.29
SH3KBP1Q96B97 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.85■□□□□ 0.29
SH3KBP1Q96B97 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.85■□□□□ 0.29
SH3KBP1Q96B97 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.85■□□□□ 0.29
SH3KBP1Q96B97 AC040169.1-201ENST00000565382 521 ntBASIC16.85■□□□□ 0.29
SH3KBP1Q96B97 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.85■□□□□ 0.29
SH3KBP1Q96B97 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.85■□□□□ 0.29
SH3KBP1Q96B97 AL353135.1-201ENST00000606729 504 ntBASIC16.85■□□□□ 0.29
SH3KBP1Q96B97 AC008667.4-201ENST00000607370 168 ntBASIC16.85■□□□□ 0.29
SH3KBP1Q96B97 GGTLC5P-201ENST00000617623 998 ntBASIC16.85■□□□□ 0.29
SH3KBP1Q96B97 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SH3KBP1Q96B97 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SH3KBP1Q96B97 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SH3KBP1Q96B97 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SH3KBP1Q96B97 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SH3KBP1Q96B97 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SH3KBP1Q96B97 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
SH3KBP1Q96B97 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SH3KBP1Q96B97 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SH3KBP1Q96B97 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SH3KBP1Q96B97 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SH3KBP1Q96B97 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SH3KBP1Q96B97 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SH3KBP1Q96B97 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
SH3KBP1Q96B97 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.84■□□□□ 0.29
SH3KBP1Q96B97 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SH3KBP1Q96B97 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.84■□□□□ 0.29
SH3KBP1Q96B97 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SH3KBP1Q96B97 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SH3KBP1Q96B97 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SH3KBP1Q96B97 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.84■□□□□ 0.29
SH3KBP1Q96B97 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
SH3KBP1Q96B97 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SH3KBP1Q96B97 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SH3KBP1Q96B97 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SH3KBP1Q96B97 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.84■□□□□ 0.29
SH3KBP1Q96B97 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
SH3KBP1Q96B97 CRYGEP-201ENST00000412192 528 ntBASIC16.84■□□□□ 0.29
SH3KBP1Q96B97 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.84■□□□□ 0.29
SH3KBP1Q96B97 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.84■□□□□ 0.29
SH3KBP1Q96B97 BX842568.4-201ENST00000421222 227 ntBASIC16.84■□□□□ 0.29
SH3KBP1Q96B97 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
SH3KBP1Q96B97 IGHV3-65-201ENST00000523210 341 ntBASIC16.84■□□□□ 0.29
SH3KBP1Q96B97 AC092865.5-201ENST00000545435 363 ntBASIC16.84■□□□□ 0.29
SH3KBP1Q96B97 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.84■□□□□ 0.29
SH3KBP1Q96B97 AC006538.3-201ENST00000612495 578 ntBASIC16.84■□□□□ 0.29
SH3KBP1Q96B97 AL805961.1-202ENST00000641562 540 ntBASIC16.84■□□□□ 0.29
SH3KBP1Q96B97 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
SH3KBP1Q96B97 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SH3KBP1Q96B97 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
SH3KBP1Q96B97 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SH3KBP1Q96B97 AC099398.1-201ENST00000567919 2776 ntBASIC16.84■□□□□ 0.29
SH3KBP1Q96B97 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SH3KBP1Q96B97 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
SH3KBP1Q96B97 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SH3KBP1Q96B97 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SH3KBP1Q96B97 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SH3KBP1Q96B97 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SH3KBP1Q96B97 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.84■□□□□ 0.29
SH3KBP1Q96B97 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
SH3KBP1Q96B97 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.84■□□□□ 0.29
SH3KBP1Q96B97 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SH3KBP1Q96B97 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.84■□□□□ 0.29
SH3KBP1Q96B97 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SH3KBP1Q96B97 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SH3KBP1Q96B97 AP001094.4-201ENST00000579008 2176 ntBASIC16.84■□□□□ 0.29
SH3KBP1Q96B97 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SH3KBP1Q96B97 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.84■□□□□ 0.29
SH3KBP1Q96B97 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
SH3KBP1Q96B97 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SH3KBP1Q96B97 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.83■□□□□ 0.29
SH3KBP1Q96B97 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SH3KBP1Q96B97 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SH3KBP1Q96B97 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SH3KBP1Q96B97 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SH3KBP1Q96B97 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms