Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.61■□□□□ 0.25
ATL1Q8WXF7 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ATL1Q8WXF7 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.61■□□□□ 0.25
ATL1Q8WXF7 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATL1Q8WXF7 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATL1Q8WXF7 CICP6-201ENST00000457191 2729 ntBASIC16.61■□□□□ 0.25
ATL1Q8WXF7 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.6■□□□□ 0.25
ATL1Q8WXF7 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
ATL1Q8WXF7 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
ATL1Q8WXF7 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.6■□□□□ 0.25
ATL1Q8WXF7 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
ATL1Q8WXF7 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.6■□□□□ 0.25
ATL1Q8WXF7 AC004870.1-201ENST00000315132 882 ntBASIC16.6■□□□□ 0.25
ATL1Q8WXF7 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.6■□□□□ 0.25
ATL1Q8WXF7 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.6■□□□□ 0.25
ATL1Q8WXF7 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.6■□□□□ 0.25
ATL1Q8WXF7 FAAHP1-202ENST00000446499 1238 ntBASIC16.6■□□□□ 0.25
ATL1Q8WXF7 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.6■□□□□ 0.25
ATL1Q8WXF7 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.6■□□□□ 0.25
ATL1Q8WXF7 OR7E14P-202ENST00000530490 1290 ntBASIC16.6■□□□□ 0.25
ATL1Q8WXF7 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.6■□□□□ 0.25
ATL1Q8WXF7 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.6■□□□□ 0.25
ATL1Q8WXF7 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.6■□□□□ 0.25
ATL1Q8WXF7 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ATL1Q8WXF7 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.6■□□□□ 0.25
ATL1Q8WXF7 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
ATL1Q8WXF7 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATL1Q8WXF7 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ATL1Q8WXF7 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATL1Q8WXF7 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATL1Q8WXF7 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ATL1Q8WXF7 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ATL1Q8WXF7 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ATL1Q8WXF7 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
ATL1Q8WXF7 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.6■□□□□ 0.25
ATL1Q8WXF7 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATL1Q8WXF7 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATL1Q8WXF7 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATL1Q8WXF7 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATL1Q8WXF7 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATL1Q8WXF7 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATL1Q8WXF7 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ATL1Q8WXF7 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATL1Q8WXF7 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATL1Q8WXF7 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
ATL1Q8WXF7 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.59■□□□□ 0.25
ATL1Q8WXF7 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATL1Q8WXF7 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.59■□□□□ 0.25
ATL1Q8WXF7 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATL1Q8WXF7 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
ATL1Q8WXF7 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATL1Q8WXF7 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATL1Q8WXF7 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
ATL1Q8WXF7 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATL1Q8WXF7 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ATL1Q8WXF7 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATL1Q8WXF7 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATL1Q8WXF7 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATL1Q8WXF7 RPS2P28-201ENST00000314255 741 ntBASIC16.59■□□□□ 0.25
ATL1Q8WXF7 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATL1Q8WXF7 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATL1Q8WXF7 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATL1Q8WXF7 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATL1Q8WXF7 AL450487.1-201ENST00000426799 995 ntBASIC16.59■□□□□ 0.25
ATL1Q8WXF7 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.59■□□□□ 0.25
ATL1Q8WXF7 EMBP1-201ENST00000458200 901 ntBASIC16.59■□□□□ 0.25
ATL1Q8WXF7 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.59■□□□□ 0.25
ATL1Q8WXF7 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.59■□□□□ 0.25
ATL1Q8WXF7 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
ATL1Q8WXF7 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
ATL1Q8WXF7 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
ATL1Q8WXF7 AF228730.7-201ENST00000641842 219 ntBASIC16.59■□□□□ 0.25
ATL1Q8WXF7 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
ATL1Q8WXF7 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.59■□□□□ 0.25
ATL1Q8WXF7 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ATL1Q8WXF7 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATL1Q8WXF7 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
ATL1Q8WXF7 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.59■□□□□ 0.25
ATL1Q8WXF7 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
ATL1Q8WXF7 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.59■□□□□ 0.25
ATL1Q8WXF7 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.59■□□□□ 0.25
ATL1Q8WXF7 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATL1Q8WXF7 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.59■□□□□ 0.25
ATL1Q8WXF7 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
ATL1Q8WXF7 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
ATL1Q8WXF7 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATL1Q8WXF7 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.59■□□□□ 0.25
ATL1Q8WXF7 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ATL1Q8WXF7 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATL1Q8WXF7 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATL1Q8WXF7 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ATL1Q8WXF7 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.58■□□□□ 0.25
ATL1Q8WXF7 AC005915.1-201ENST00000624912 2018 ntBASIC16.58■□□□□ 0.25
ATL1Q8WXF7 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.58■□□□□ 0.25
ATL1Q8WXF7 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
ATL1Q8WXF7 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.58■□□□□ 0.25
ATL1Q8WXF7 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
ATL1Q8WXF7 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ATL1Q8WXF7 AL162727.3-201ENST00000635661 2787 ntBASIC16.58■□□□□ 0.25
ATL1Q8WXF7 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms