Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.46■□□□□ 0.39
SCG3Q8WXD2 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCG3Q8WXD2 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.46■□□□□ 0.39
SCG3Q8WXD2 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.46■□□□□ 0.39
SCG3Q8WXD2 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
SCG3Q8WXD2 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.46■□□□□ 0.39
SCG3Q8WXD2 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCG3Q8WXD2 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.46■□□□□ 0.39
SCG3Q8WXD2 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCG3Q8WXD2 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.46■□□□□ 0.39
SCG3Q8WXD2 PCDHA14-201ENST00000506751 2298 ntBASIC17.46■□□□□ 0.39
SCG3Q8WXD2 MST1L-201ENST00000442552 2185 ntBASIC17.46■□□□□ 0.39
SCG3Q8WXD2 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SCG3Q8WXD2 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCG3Q8WXD2 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.46■□□□□ 0.39
SCG3Q8WXD2 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
SCG3Q8WXD2 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
SCG3Q8WXD2 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.46■□□□□ 0.38
SCG3Q8WXD2 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SCG3Q8WXD2 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.45■□□□□ 0.38
SCG3Q8WXD2 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SCG3Q8WXD2 AL356309.3-201ENST00000624132 1934 ntBASIC17.45■□□□□ 0.38
SCG3Q8WXD2 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCG3Q8WXD2 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.45■□□□□ 0.38
SCG3Q8WXD2 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SCG3Q8WXD2 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCG3Q8WXD2 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SCG3Q8WXD2 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.45■□□□□ 0.38
SCG3Q8WXD2 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.45■□□□□ 0.38
SCG3Q8WXD2 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.45■□□□□ 0.38
SCG3Q8WXD2 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCG3Q8WXD2 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCG3Q8WXD2 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCG3Q8WXD2 PMS2P1-201ENST00000431037 1228 ntBASIC17.45■□□□□ 0.38
SCG3Q8WXD2 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.45■□□□□ 0.38
SCG3Q8WXD2 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SCG3Q8WXD2 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.45■□□□□ 0.38
SCG3Q8WXD2 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
SCG3Q8WXD2 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.45■□□□□ 0.38
SCG3Q8WXD2 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.45■□□□□ 0.38
SCG3Q8WXD2 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.45■□□□□ 0.38
SCG3Q8WXD2 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCG3Q8WXD2 AC116353.5-201ENST00000638148 1699 ntBASIC17.45■□□□□ 0.38
SCG3Q8WXD2 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SCG3Q8WXD2 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SCG3Q8WXD2 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SCG3Q8WXD2 AL049757.1-201ENST00000616842 1596 ntBASIC17.45■□□□□ 0.38
SCG3Q8WXD2 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCG3Q8WXD2 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCG3Q8WXD2 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.44■□□□□ 0.38
SCG3Q8WXD2 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCG3Q8WXD2 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCG3Q8WXD2 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SCG3Q8WXD2 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SCG3Q8WXD2 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.44■□□□□ 0.38
SCG3Q8WXD2 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCG3Q8WXD2 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCG3Q8WXD2 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCG3Q8WXD2 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCG3Q8WXD2 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.44■□□□□ 0.38
SCG3Q8WXD2 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCG3Q8WXD2 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCG3Q8WXD2 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
SCG3Q8WXD2 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCG3Q8WXD2 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.44■□□□□ 0.38
SCG3Q8WXD2 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCG3Q8WXD2 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.44■□□□□ 0.38
SCG3Q8WXD2 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.44■□□□□ 0.38
SCG3Q8WXD2 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
SCG3Q8WXD2 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.44■□□□□ 0.38
SCG3Q8WXD2 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.44■□□□□ 0.38
SCG3Q8WXD2 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.44■□□□□ 0.38
SCG3Q8WXD2 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.44■□□□□ 0.38
SCG3Q8WXD2 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.44■□□□□ 0.38
SCG3Q8WXD2 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCG3Q8WXD2 AC117500.6-201ENST00000624871 588 ntBASIC17.44■□□□□ 0.38
SCG3Q8WXD2 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.44■□□□□ 0.38
SCG3Q8WXD2 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCG3Q8WXD2 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SCG3Q8WXD2 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.44■□□□□ 0.38
SCG3Q8WXD2 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCG3Q8WXD2 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCG3Q8WXD2 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.44■□□□□ 0.38
SCG3Q8WXD2 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.44■□□□□ 0.38
SCG3Q8WXD2 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCG3Q8WXD2 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCG3Q8WXD2 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SCG3Q8WXD2 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.44■□□□□ 0.38
SCG3Q8WXD2 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCG3Q8WXD2 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCG3Q8WXD2 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCG3Q8WXD2 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.44■□□□□ 0.38
SCG3Q8WXD2 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCG3Q8WXD2 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCG3Q8WXD2 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.44■□□□□ 0.38
SCG3Q8WXD2 AL353593.2-201ENST00000602529 1483 ntBASIC17.44■□□□□ 0.38
SCG3Q8WXD2 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SCG3Q8WXD2 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SCG3Q8WXD2 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SCG3Q8WXD2 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms