Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 AP001350.2-201ENST00000625104 1094 ntBASIC18.21■□□□□ 0.51
BEST2Q8NFU1 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BEST2Q8NFU1 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BEST2Q8NFU1 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
BEST2Q8NFU1 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BEST2Q8NFU1 AL645608.8-201ENST00000606034 2086 ntBASIC18.21■□□□□ 0.51
BEST2Q8NFU1 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
BEST2Q8NFU1 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
BEST2Q8NFU1 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
BEST2Q8NFU1 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BEST2Q8NFU1 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
BEST2Q8NFU1 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BEST2Q8NFU1 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.21■□□□□ 0.5
BEST2Q8NFU1 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
BEST2Q8NFU1 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
BEST2Q8NFU1 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
BEST2Q8NFU1 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.2■□□□□ 0.5
BEST2Q8NFU1 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
BEST2Q8NFU1 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.2■□□□□ 0.5
BEST2Q8NFU1 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC18.2■□□□□ 0.5
BEST2Q8NFU1 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BEST2Q8NFU1 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
BEST2Q8NFU1 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BEST2Q8NFU1 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
BEST2Q8NFU1 FAM58CP-201ENST00000435741 640 ntBASIC18.2■□□□□ 0.5
BEST2Q8NFU1 URGCP-206ENST00000446958 365 ntTSL 2 BASIC18.2■□□□□ 0.5
BEST2Q8NFU1 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC18.2■□□□□ 0.5
BEST2Q8NFU1 AC087641.1-201ENST00000557561 1021 ntBASIC18.2■□□□□ 0.5
BEST2Q8NFU1 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC18.2■□□□□ 0.5
BEST2Q8NFU1 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
BEST2Q8NFU1 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
BEST2Q8NFU1 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BEST2Q8NFU1 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
BEST2Q8NFU1 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BEST2Q8NFU1 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BEST2Q8NFU1 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.19■□□□□ 0.5
BEST2Q8NFU1 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BEST2Q8NFU1 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
BEST2Q8NFU1 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
BEST2Q8NFU1 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BEST2Q8NFU1 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
BEST2Q8NFU1 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BEST2Q8NFU1 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
BEST2Q8NFU1 HMGA1P7-201ENST00000406908 502 ntBASIC18.19■□□□□ 0.5
BEST2Q8NFU1 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC18.19■□□□□ 0.5
BEST2Q8NFU1 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC18.19■□□□□ 0.5
BEST2Q8NFU1 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
BEST2Q8NFU1 AP002472.1-201ENST00000577490 586 ntBASIC18.19■□□□□ 0.5
BEST2Q8NFU1 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.19■□□□□ 0.5
BEST2Q8NFU1 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
BEST2Q8NFU1 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
BEST2Q8NFU1 AC091812.2-201ENST00000619081 385 ntBASIC18.19■□□□□ 0.5
BEST2Q8NFU1 AC131009.4-201ENST00000624048 1740 ntBASIC18.19■□□□□ 0.5
BEST2Q8NFU1 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.19■□□□□ 0.5
BEST2Q8NFU1 AC079781.4-201ENST00000641908 219 ntBASIC18.19■□□□□ 0.5
BEST2Q8NFU1 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BEST2Q8NFU1 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
BEST2Q8NFU1 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.19■□□□□ 0.5
BEST2Q8NFU1 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
BEST2Q8NFU1 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
BEST2Q8NFU1 SLC22A20-204ENST00000530038 1673 ntBASIC18.18■□□□□ 0.5
BEST2Q8NFU1 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
BEST2Q8NFU1 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
BEST2Q8NFU1 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC18.18■□□□□ 0.5
BEST2Q8NFU1 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
BEST2Q8NFU1 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
BEST2Q8NFU1 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
BEST2Q8NFU1 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
BEST2Q8NFU1 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BEST2Q8NFU1 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BEST2Q8NFU1 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BEST2Q8NFU1 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
BEST2Q8NFU1 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BEST2Q8NFU1 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BEST2Q8NFU1 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BEST2Q8NFU1 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.18■□□□□ 0.5
BEST2Q8NFU1 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BEST2Q8NFU1 AC211486.1-202ENST00000416371 468 ntBASIC18.18■□□□□ 0.5
BEST2Q8NFU1 AC140658.5-201ENST00000438532 169 ntBASIC18.18■□□□□ 0.5
BEST2Q8NFU1 AC211476.1-201ENST00000503899 468 ntBASIC18.18■□□□□ 0.5
BEST2Q8NFU1 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
BEST2Q8NFU1 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.18■□□□□ 0.5
BEST2Q8NFU1 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
BEST2Q8NFU1 WT1-AS_2.1-201ENST00000613208 137 ntBASIC18.18■□□□□ 0.5
BEST2Q8NFU1 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC18.18■□□□□ 0.5
BEST2Q8NFU1 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.18■□□□□ 0.5
BEST2Q8NFU1 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.18■□□□□ 0.5
BEST2Q8NFU1 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
BEST2Q8NFU1 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
BEST2Q8NFU1 AC092919.2-201ENST00000623631 1645 ntBASIC18.18■□□□□ 0.5
BEST2Q8NFU1 AC108860.2-201ENST00000562760 2183 ntBASIC18.18■□□□□ 0.5
BEST2Q8NFU1 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BEST2Q8NFU1 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
BEST2Q8NFU1 AC092068.3-201ENST00000587894 2016 ntBASIC18.18■□□□□ 0.5
BEST2Q8NFU1 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
BEST2Q8NFU1 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
BEST2Q8NFU1 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
BEST2Q8NFU1 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
BEST2Q8NFU1 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.18■□□□□ 0.5
BEST2Q8NFU1 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms