Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTL9Q8NET4 AC018470.1-201ENST00000624790 3129 ntBASIC20.76■□□□□ 0.91
RTL9Q8NET4 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC20.76■□□□□ 0.91
RTL9Q8NET4 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTL9Q8NET4 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RTL9Q8NET4 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RTL9Q8NET4 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTL9Q8NET4 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTL9Q8NET4 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC20.76■□□□□ 0.91
RTL9Q8NET4 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTL9Q8NET4 AC068880.1-201ENST00000507289 2297 ntBASIC20.76■□□□□ 0.91
RTL9Q8NET4 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
RTL9Q8NET4 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RTL9Q8NET4 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTL9Q8NET4 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RTL9Q8NET4 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RTL9Q8NET4 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTL9Q8NET4 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTL9Q8NET4 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTL9Q8NET4 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC20.75■□□□□ 0.91
RTL9Q8NET4 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC20.75■□□□□ 0.91
RTL9Q8NET4 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC20.75■□□□□ 0.91
RTL9Q8NET4 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RTL9Q8NET4 SLC25A39P2-201ENST00000537614 270 ntBASIC20.75■□□□□ 0.91
RTL9Q8NET4 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RTL9Q8NET4 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTL9Q8NET4 AC073389.1-201ENST00000595595 795 ntBASIC20.75■□□□□ 0.91
RTL9Q8NET4 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTL9Q8NET4 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RTL9Q8NET4 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTL9Q8NET4 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTL9Q8NET4 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
RTL9Q8NET4 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTL9Q8NET4 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTL9Q8NET4 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC20.75■□□□□ 0.91
RTL9Q8NET4 UXT-AS1-201ENST00000590504 1525 ntBASIC20.75■□□□□ 0.91
RTL9Q8NET4 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTL9Q8NET4 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
RTL9Q8NET4 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RTL9Q8NET4 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RTL9Q8NET4 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RTL9Q8NET4 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC20.74■□□□□ 0.91
RTL9Q8NET4 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RTL9Q8NET4 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC20.74■□□□□ 0.91
RTL9Q8NET4 WRB-204ENST00000398753 699 ntTSL 3 BASIC20.74■□□□□ 0.91
RTL9Q8NET4 AC142381.1-201ENST00000426099 345 ntBASIC20.74■□□□□ 0.91
RTL9Q8NET4 AC055876.3-201ENST00000431496 288 ntBASIC20.74■□□□□ 0.91
RTL9Q8NET4 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC20.74■□□□□ 0.91
RTL9Q8NET4 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
RTL9Q8NET4 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC20.74■□□□□ 0.91
RTL9Q8NET4 AC138649.4-201ENST00000612222 287 ntBASIC20.74■□□□□ 0.91
RTL9Q8NET4 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC20.74■□□□□ 0.91
RTL9Q8NET4 AF228730.6-201ENST00000641497 218 ntBASIC20.74■□□□□ 0.91
RTL9Q8NET4 AC084121.3-201ENST00000641716 218 ntBASIC20.74■□□□□ 0.91
RTL9Q8NET4 AC105233.6-201ENST00000642093 218 ntBASIC20.74■□□□□ 0.91
RTL9Q8NET4 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RTL9Q8NET4 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RTL9Q8NET4 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RTL9Q8NET4 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
RTL9Q8NET4 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
RTL9Q8NET4 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RTL9Q8NET4 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC20.74■□□□□ 0.91
RTL9Q8NET4 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RTL9Q8NET4 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RTL9Q8NET4 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RTL9Q8NET4 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
RTL9Q8NET4 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RTL9Q8NET4 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RTL9Q8NET4 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
RTL9Q8NET4 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC20.74■□□□□ 0.91
RTL9Q8NET4 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RTL9Q8NET4 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RTL9Q8NET4 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
RTL9Q8NET4 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC20.74■□□□□ 0.91
RTL9Q8NET4 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RTL9Q8NET4 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RTL9Q8NET4 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC20.73■□□□□ 0.91
RTL9Q8NET4 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RTL9Q8NET4 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
RTL9Q8NET4 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RTL9Q8NET4 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RTL9Q8NET4 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RTL9Q8NET4 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC20.73■□□□□ 0.91
RTL9Q8NET4 KLF2P3-201ENST00000451977 1087 ntBASIC20.73■□□□□ 0.91
RTL9Q8NET4 UGT1A2P-201ENST00000454886 866 ntBASIC20.73■□□□□ 0.91
RTL9Q8NET4 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC20.73■□□□□ 0.91
RTL9Q8NET4 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC20.73■□□□□ 0.91
RTL9Q8NET4 NKG7-205ENST00000600427 520 ntTSL 3 BASIC20.73■□□□□ 0.91
RTL9Q8NET4 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
RTL9Q8NET4 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC20.73■□□□□ 0.91
RTL9Q8NET4 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RTL9Q8NET4 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RTL9Q8NET4 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RTL9Q8NET4 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RTL9Q8NET4 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RTL9Q8NET4 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RTL9Q8NET4 TUBB3P1-201ENST00000405796 1332 ntBASIC20.73■□□□□ 0.91
RTL9Q8NET4 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RTL9Q8NET4 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RTL9Q8NET4 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms