Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 AC136632.2-201ENST00000512891 861 ntBASIC14.88□□□□□ -0.03
CPEB3Q8NE35 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC14.88□□□□□ -0.03
CPEB3Q8NE35 TERC-201ENST00000602385 541 ntBASIC14.88□□□□□ -0.03
CPEB3Q8NE35 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC14.88□□□□□ -0.03
CPEB3Q8NE35 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CPEB3Q8NE35 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CPEB3Q8NE35 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CPEB3Q8NE35 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.88□□□□□ -0.03
CPEB3Q8NE35 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.88□□□□□ -0.03
CPEB3Q8NE35 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CPEB3Q8NE35 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CPEB3Q8NE35 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
CPEB3Q8NE35 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CPEB3Q8NE35 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CPEB3Q8NE35 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CPEB3Q8NE35 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CPEB3Q8NE35 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CPEB3Q8NE35 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CPEB3Q8NE35 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CPEB3Q8NE35 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC14.87□□□□□ -0.03
CPEB3Q8NE35 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
CPEB3Q8NE35 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CPEB3Q8NE35 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CPEB3Q8NE35 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CPEB3Q8NE35 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CPEB3Q8NE35 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CPEB3Q8NE35 AC005915.1-201ENST00000624912 2018 ntBASIC14.87□□□□□ -0.03
CPEB3Q8NE35 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CPEB3Q8NE35 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
CPEB3Q8NE35 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC14.87□□□□□ -0.03
CPEB3Q8NE35 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CPEB3Q8NE35 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
CPEB3Q8NE35 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CPEB3Q8NE35 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC14.87□□□□□ -0.03
CPEB3Q8NE35 PAWRP1-201ENST00000451083 565 ntBASIC14.87□□□□□ -0.03
CPEB3Q8NE35 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CPEB3Q8NE35 RPS15P9-201ENST00000494093 319 ntBASIC14.87□□□□□ -0.03
CPEB3Q8NE35 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CPEB3Q8NE35 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CPEB3Q8NE35 ETFA-208ENST00000559602 792 ntTSL 3 BASIC14.87□□□□□ -0.03
CPEB3Q8NE35 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC14.87□□□□□ -0.03
CPEB3Q8NE35 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC14.87□□□□□ -0.03
CPEB3Q8NE35 AL356488.2-201ENST00000602755 427 ntBASIC14.87□□□□□ -0.03
CPEB3Q8NE35 MIR7706-201ENST00000613747 67 ntBASIC14.87□□□□□ -0.03
CPEB3Q8NE35 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC14.87□□□□□ -0.03
CPEB3Q8NE35 AL805961.1-202ENST00000641562 540 ntBASIC14.87□□□□□ -0.03
CPEB3Q8NE35 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CPEB3Q8NE35 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CPEB3Q8NE35 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CPEB3Q8NE35 AL121761.2-201ENST00000598007 1648 ntBASIC14.87□□□□□ -0.03
CPEB3Q8NE35 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CPEB3Q8NE35 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CPEB3Q8NE35 HLA-A-201ENST00000376802 1334 ntBASIC14.87□□□□□ -0.03
CPEB3Q8NE35 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC14.87□□□□□ -0.03
CPEB3Q8NE35 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CPEB3Q8NE35 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CPEB3Q8NE35 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CPEB3Q8NE35 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.87□□□□□ -0.03
CPEB3Q8NE35 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CPEB3Q8NE35 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC14.86□□□□□ -0.03
CPEB3Q8NE35 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CPEB3Q8NE35 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CPEB3Q8NE35 NF2-208ENST00000403435 2568 ntTSL 5 BASIC14.86□□□□□ -0.03
CPEB3Q8NE35 PI4KAP1-204ENST00000612579 1703 ntBASIC14.86□□□□□ -0.03
CPEB3Q8NE35 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CPEB3Q8NE35 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CPEB3Q8NE35 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CPEB3Q8NE35 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CPEB3Q8NE35 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CPEB3Q8NE35 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CPEB3Q8NE35 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CPEB3Q8NE35 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.86□□□□□ -0.03
CPEB3Q8NE35 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CPEB3Q8NE35 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CPEB3Q8NE35 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CPEB3Q8NE35 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CPEB3Q8NE35 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CPEB3Q8NE35 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.86□□□□□ -0.03
CPEB3Q8NE35 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CPEB3Q8NE35 DUX4L17-201ENST00000557360 1267 ntBASIC14.86□□□□□ -0.03
CPEB3Q8NE35 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CPEB3Q8NE35 AP001005.1-201ENST00000571755 1248 ntBASIC14.86□□□□□ -0.03
CPEB3Q8NE35 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC14.86□□□□□ -0.03
CPEB3Q8NE35 PRKN-208ENST00000610470 531 ntTSL 2 BASIC14.86□□□□□ -0.03
CPEB3Q8NE35 PRKN-209ENST00000612485 225 ntTSL 5 BASIC14.86□□□□□ -0.03
CPEB3Q8NE35 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
CPEB3Q8NE35 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC14.86□□□□□ -0.03
CPEB3Q8NE35 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CPEB3Q8NE35 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.86□□□□□ -0.03
CPEB3Q8NE35 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CPEB3Q8NE35 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC14.86□□□□□ -0.03
CPEB3Q8NE35 AC105020.1-201ENST00000435356 2205 ntBASIC14.86□□□□□ -0.03
CPEB3Q8NE35 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CPEB3Q8NE35 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CPEB3Q8NE35 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CPEB3Q8NE35 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC14.86□□□□□ -0.03
CPEB3Q8NE35 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CPEB3Q8NE35 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CPEB3Q8NE35 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CPEB3Q8NE35 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms