Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
KRT78Q8N1N4 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT78Q8N1N4 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT78Q8N1N4 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.4■□□□□ 0.22
KRT78Q8N1N4 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.4■□□□□ 0.22
KRT78Q8N1N4 AC105020.1-201ENST00000435356 2205 ntBASIC16.4■□□□□ 0.22
KRT78Q8N1N4 KRT18P67-201ENST00000432816 1264 ntBASIC16.4■□□□□ 0.22
KRT78Q8N1N4 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.4■□□□□ 0.22
KRT78Q8N1N4 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.4■□□□□ 0.22
KRT78Q8N1N4 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.4■□□□□ 0.22
KRT78Q8N1N4 MIR1199-201ENST00000621445 119 ntBASIC16.4■□□□□ 0.22
KRT78Q8N1N4 TP73-AS1-207ENST00000624167 988 ntBASIC16.4■□□□□ 0.22
KRT78Q8N1N4 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.4■□□□□ 0.22
KRT78Q8N1N4 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.4■□□□□ 0.22
KRT78Q8N1N4 AF228730.7-201ENST00000641842 219 ntBASIC16.4■□□□□ 0.22
KRT78Q8N1N4 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT78Q8N1N4 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT78Q8N1N4 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT78Q8N1N4 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT78Q8N1N4 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT78Q8N1N4 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT78Q8N1N4 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KRT78Q8N1N4 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.4■□□□□ 0.22
KRT78Q8N1N4 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT78Q8N1N4 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KRT78Q8N1N4 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.4■□□□□ 0.22
KRT78Q8N1N4 AC005915.1-201ENST00000624912 2018 ntBASIC16.4■□□□□ 0.22
KRT78Q8N1N4 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
KRT78Q8N1N4 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.39■□□□□ 0.21
KRT78Q8N1N4 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT78Q8N1N4 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.39■□□□□ 0.21
KRT78Q8N1N4 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
KRT78Q8N1N4 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.39■□□□□ 0.21
KRT78Q8N1N4 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT78Q8N1N4 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
KRT78Q8N1N4 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
KRT78Q8N1N4 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
KRT78Q8N1N4 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT78Q8N1N4 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT78Q8N1N4 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.39■□□□□ 0.21
KRT78Q8N1N4 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
KRT78Q8N1N4 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
KRT78Q8N1N4 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.39■□□□□ 0.21
KRT78Q8N1N4 PTCHD3P3-201ENST00000403073 906 ntBASIC16.39■□□□□ 0.21
KRT78Q8N1N4 ELK2BP-201ENST00000415014 1224 ntBASIC16.39■□□□□ 0.21
KRT78Q8N1N4 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.39■□□□□ 0.21
KRT78Q8N1N4 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.39■□□□□ 0.21
KRT78Q8N1N4 AL805961.1-202ENST00000641562 540 ntBASIC16.39■□□□□ 0.21
KRT78Q8N1N4 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
KRT78Q8N1N4 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT78Q8N1N4 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
KRT78Q8N1N4 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.39■□□□□ 0.21
KRT78Q8N1N4 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
KRT78Q8N1N4 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.39■□□□□ 0.21
KRT78Q8N1N4 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT78Q8N1N4 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT78Q8N1N4 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT78Q8N1N4 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.39■□□□□ 0.21
KRT78Q8N1N4 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.39■□□□□ 0.21
KRT78Q8N1N4 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT78Q8N1N4 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT78Q8N1N4 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.38■□□□□ 0.21
KRT78Q8N1N4 AC006504.4-201ENST00000592118 1568 ntBASIC16.38■□□□□ 0.21
KRT78Q8N1N4 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
KRT78Q8N1N4 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
KRT78Q8N1N4 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KRT78Q8N1N4 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
KRT78Q8N1N4 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.38■□□□□ 0.21
KRT78Q8N1N4 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
KRT78Q8N1N4 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
KRT78Q8N1N4 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
KRT78Q8N1N4 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
KRT78Q8N1N4 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
KRT78Q8N1N4 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
KRT78Q8N1N4 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
KRT78Q8N1N4 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.38■□□□□ 0.21
KRT78Q8N1N4 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KRT78Q8N1N4 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
KRT78Q8N1N4 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.38■□□□□ 0.21
KRT78Q8N1N4 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.38■□□□□ 0.21
KRT78Q8N1N4 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.38■□□□□ 0.21
KRT78Q8N1N4 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.38■□□□□ 0.21
KRT78Q8N1N4 TPM4P1-201ENST00000436100 807 ntBASIC16.38■□□□□ 0.21
KRT78Q8N1N4 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KRT78Q8N1N4 AC079781.3-201ENST00000449110 356 ntBASIC16.38■□□□□ 0.21
KRT78Q8N1N4 AC018712.1-201ENST00000455767 687 ntBASIC16.38■□□□□ 0.21
KRT78Q8N1N4 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.38■□□□□ 0.21
KRT78Q8N1N4 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
KRT78Q8N1N4 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.38■□□□□ 0.21
KRT78Q8N1N4 AC136632.2-201ENST00000512891 861 ntBASIC16.38■□□□□ 0.21
KRT78Q8N1N4 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.38■□□□□ 0.21
KRT78Q8N1N4 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.38■□□□□ 0.21
KRT78Q8N1N4 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KRT78Q8N1N4 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.38■□□□□ 0.21
KRT78Q8N1N4 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.38■□□□□ 0.21
KRT78Q8N1N4 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
KRT78Q8N1N4 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.38■□□□□ 0.21
KRT78Q8N1N4 AC008735.5-201ENST00000623544 497 ntBASIC16.38■□□□□ 0.21
KRT78Q8N1N4 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KRT78Q8N1N4 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms