Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC15.73■□□□□ 0.11
COL27A1Q8IZC6 TUBB8P12-201ENST00000308911 1335 ntBASIC15.73■□□□□ 0.11
COL27A1Q8IZC6 TUBB7P-202ENST00000428444 1305 ntBASIC15.73■□□□□ 0.11
COL27A1Q8IZC6 TUBB8P7-204ENST00000567960 1332 ntBASIC15.73■□□□□ 0.11
COL27A1Q8IZC6 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.73■□□□□ 0.11
COL27A1Q8IZC6 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
COL27A1Q8IZC6 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
COL27A1Q8IZC6 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
COL27A1Q8IZC6 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.73■□□□□ 0.11
COL27A1Q8IZC6 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
COL27A1Q8IZC6 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.73■□□□□ 0.11
COL27A1Q8IZC6 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.73■□□□□ 0.11
COL27A1Q8IZC6 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.73■□□□□ 0.11
COL27A1Q8IZC6 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
COL27A1Q8IZC6 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.73■□□□□ 0.11
COL27A1Q8IZC6 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC15.73■□□□□ 0.11
COL27A1Q8IZC6 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC15.73■□□□□ 0.11
COL27A1Q8IZC6 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
COL27A1Q8IZC6 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.73■□□□□ 0.11
COL27A1Q8IZC6 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
COL27A1Q8IZC6 AL008721.1-201ENST00000609964 604 ntBASIC15.73■□□□□ 0.11
COL27A1Q8IZC6 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC15.73■□□□□ 0.11
COL27A1Q8IZC6 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
COL27A1Q8IZC6 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
COL27A1Q8IZC6 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.73■□□□□ 0.11
COL27A1Q8IZC6 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.73■□□□□ 0.11
COL27A1Q8IZC6 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
COL27A1Q8IZC6 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.73■□□□□ 0.11
COL27A1Q8IZC6 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL27A1Q8IZC6 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL27A1Q8IZC6 BTBD7P1-201ENST00000447253 1453 ntBASIC15.72■□□□□ 0.11
COL27A1Q8IZC6 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
COL27A1Q8IZC6 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
COL27A1Q8IZC6 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
COL27A1Q8IZC6 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL27A1Q8IZC6 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
COL27A1Q8IZC6 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
COL27A1Q8IZC6 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.72■□□□□ 0.11
COL27A1Q8IZC6 TMEM14DP-201ENST00000422205 345 ntBASIC15.72■□□□□ 0.11
COL27A1Q8IZC6 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.72■□□□□ 0.11
COL27A1Q8IZC6 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.72■□□□□ 0.11
COL27A1Q8IZC6 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL27A1Q8IZC6 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.72■□□□□ 0.11
COL27A1Q8IZC6 CHCHD2P3-201ENST00000603038 451 ntBASIC15.72■□□□□ 0.11
COL27A1Q8IZC6 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL27A1Q8IZC6 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL27A1Q8IZC6 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.72■□□□□ 0.11
COL27A1Q8IZC6 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
COL27A1Q8IZC6 KRT8P12-202ENST00000472924 1397 ntBASIC15.72■□□□□ 0.11
COL27A1Q8IZC6 AC134043.2-201ENST00000624206 2238 ntBASIC15.72■□□□□ 0.11
COL27A1Q8IZC6 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC15.72■□□□□ 0.11
COL27A1Q8IZC6 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
COL27A1Q8IZC6 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.72■□□□□ 0.11
COL27A1Q8IZC6 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.72■□□□□ 0.11
COL27A1Q8IZC6 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.72■□□□□ 0.11
COL27A1Q8IZC6 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
COL27A1Q8IZC6 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL27A1Q8IZC6 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL27A1Q8IZC6 LINC02012-201ENST00000608206 1725 ntBASIC15.72■□□□□ 0.11
COL27A1Q8IZC6 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL27A1Q8IZC6 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL27A1Q8IZC6 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL27A1Q8IZC6 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.71■□□□□ 0.11
COL27A1Q8IZC6 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
COL27A1Q8IZC6 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
COL27A1Q8IZC6 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
COL27A1Q8IZC6 AL589739.1-201ENST00000607720 493 ntBASIC15.71■□□□□ 0.11
COL27A1Q8IZC6 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COL27A1Q8IZC6 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COL27A1Q8IZC6 AL391825.1-201ENST00000457671 1364 ntBASIC15.71■□□□□ 0.11
COL27A1Q8IZC6 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC15.71■□□□□ 0.11
COL27A1Q8IZC6 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COL27A1Q8IZC6 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COL27A1Q8IZC6 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COL27A1Q8IZC6 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COL27A1Q8IZC6 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.71■□□□□ 0.11
COL27A1Q8IZC6 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
COL27A1Q8IZC6 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
COL27A1Q8IZC6 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COL27A1Q8IZC6 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COL27A1Q8IZC6 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
COL27A1Q8IZC6 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
COL27A1Q8IZC6 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
COL27A1Q8IZC6 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC15.71■□□□□ 0.11
COL27A1Q8IZC6 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.71■□□□□ 0.11
COL27A1Q8IZC6 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
COL27A1Q8IZC6 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
COL27A1Q8IZC6 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COL27A1Q8IZC6 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
COL27A1Q8IZC6 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
COL27A1Q8IZC6 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
COL27A1Q8IZC6 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COL27A1Q8IZC6 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COL27A1Q8IZC6 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
COL27A1Q8IZC6 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.71■□□□□ 0.11
COL27A1Q8IZC6 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
COL27A1Q8IZC6 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.71■□□□□ 0.11
COL27A1Q8IZC6 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.71■□□□□ 0.11
COL27A1Q8IZC6 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
COL27A1Q8IZC6 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms