Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.92■□□□□ 0.3
NUDCD3Q8IVD9 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NUDCD3Q8IVD9 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NUDCD3Q8IVD9 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NUDCD3Q8IVD9 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.92■□□□□ 0.3
NUDCD3Q8IVD9 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NUDCD3Q8IVD9 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NUDCD3Q8IVD9 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NUDCD3Q8IVD9 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NUDCD3Q8IVD9 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NUDCD3Q8IVD9 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
NUDCD3Q8IVD9 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NUDCD3Q8IVD9 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NUDCD3Q8IVD9 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.91■□□□□ 0.3
NUDCD3Q8IVD9 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.91■□□□□ 0.3
NUDCD3Q8IVD9 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
NUDCD3Q8IVD9 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NUDCD3Q8IVD9 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
NUDCD3Q8IVD9 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
NUDCD3Q8IVD9 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.91■□□□□ 0.3
NUDCD3Q8IVD9 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
NUDCD3Q8IVD9 BX664615.1-201ENST00000443558 458 ntBASIC16.91■□□□□ 0.3
NUDCD3Q8IVD9 VENTXP5-201ENST00000523979 775 ntBASIC16.91■□□□□ 0.3
NUDCD3Q8IVD9 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NUDCD3Q8IVD9 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.91■□□□□ 0.3
NUDCD3Q8IVD9 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NUDCD3Q8IVD9 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.91■□□□□ 0.3
NUDCD3Q8IVD9 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.91■□□□□ 0.3
NUDCD3Q8IVD9 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
NUDCD3Q8IVD9 TMEM191A-211ENST00000637163 1067 ntBASIC16.91■□□□□ 0.3
NUDCD3Q8IVD9 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NUDCD3Q8IVD9 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NUDCD3Q8IVD9 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NUDCD3Q8IVD9 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NUDCD3Q8IVD9 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.91■□□□□ 0.3
NUDCD3Q8IVD9 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NUDCD3Q8IVD9 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.91■□□□□ 0.3
NUDCD3Q8IVD9 AL353593.2-201ENST00000602529 1483 ntBASIC16.91■□□□□ 0.3
NUDCD3Q8IVD9 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.91■□□□□ 0.3
NUDCD3Q8IVD9 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.91■□□□□ 0.3
NUDCD3Q8IVD9 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.91■□□□□ 0.3
NUDCD3Q8IVD9 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.91■□□□□ 0.3
NUDCD3Q8IVD9 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
NUDCD3Q8IVD9 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NUDCD3Q8IVD9 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.91■□□□□ 0.3
NUDCD3Q8IVD9 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NUDCD3Q8IVD9 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NUDCD3Q8IVD9 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.9■□□□□ 0.3
NUDCD3Q8IVD9 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NUDCD3Q8IVD9 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NUDCD3Q8IVD9 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NUDCD3Q8IVD9 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NUDCD3Q8IVD9 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NUDCD3Q8IVD9 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
NUDCD3Q8IVD9 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NUDCD3Q8IVD9 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NUDCD3Q8IVD9 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NUDCD3Q8IVD9 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NUDCD3Q8IVD9 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.9■□□□□ 0.3
NUDCD3Q8IVD9 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NUDCD3Q8IVD9 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NUDCD3Q8IVD9 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
NUDCD3Q8IVD9 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NUDCD3Q8IVD9 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.9■□□□□ 0.3
NUDCD3Q8IVD9 AL138831.2-201ENST00000606564 490 ntBASIC16.9■□□□□ 0.3
NUDCD3Q8IVD9 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.9■□□□□ 0.3
NUDCD3Q8IVD9 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NUDCD3Q8IVD9 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NUDCD3Q8IVD9 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.9■□□□□ 0.3
NUDCD3Q8IVD9 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.9■□□□□ 0.3
NUDCD3Q8IVD9 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
NUDCD3Q8IVD9 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
NUDCD3Q8IVD9 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NUDCD3Q8IVD9 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NUDCD3Q8IVD9 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
NUDCD3Q8IVD9 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.9■□□□□ 0.3
NUDCD3Q8IVD9 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.9■□□□□ 0.3
NUDCD3Q8IVD9 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NUDCD3Q8IVD9 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NUDCD3Q8IVD9 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NUDCD3Q8IVD9 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
NUDCD3Q8IVD9 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
NUDCD3Q8IVD9 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
NUDCD3Q8IVD9 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
NUDCD3Q8IVD9 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
NUDCD3Q8IVD9 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
NUDCD3Q8IVD9 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
NUDCD3Q8IVD9 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
NUDCD3Q8IVD9 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.3
NUDCD3Q8IVD9 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NUDCD3Q8IVD9 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.89■□□□□ 0.29
NUDCD3Q8IVD9 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NUDCD3Q8IVD9 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
NUDCD3Q8IVD9 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
NUDCD3Q8IVD9 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
NUDCD3Q8IVD9 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
NUDCD3Q8IVD9 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NUDCD3Q8IVD9 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.89■□□□□ 0.29
NUDCD3Q8IVD9 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NUDCD3Q8IVD9 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms