Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CRLF3Q8IUI8 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.01■□□□□ 0.31
CRLF3Q8IUI8 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.01■□□□□ 0.31
CRLF3Q8IUI8 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.01■□□□□ 0.31
CRLF3Q8IUI8 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.01■□□□□ 0.31
CRLF3Q8IUI8 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.01■□□□□ 0.31
CRLF3Q8IUI8 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.01■□□□□ 0.31
CRLF3Q8IUI8 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
CRLF3Q8IUI8 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.01■□□□□ 0.31
CRLF3Q8IUI8 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CRLF3Q8IUI8 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CRLF3Q8IUI8 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CRLF3Q8IUI8 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.01■□□□□ 0.31
CRLF3Q8IUI8 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.01■□□□□ 0.31
CRLF3Q8IUI8 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.01■□□□□ 0.31
CRLF3Q8IUI8 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CRLF3Q8IUI8 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CRLF3Q8IUI8 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CRLF3Q8IUI8 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CRLF3Q8IUI8 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.01■□□□□ 0.31
CRLF3Q8IUI8 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CRLF3Q8IUI8 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CRLF3Q8IUI8 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CRLF3Q8IUI8 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CRLF3Q8IUI8 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CRLF3Q8IUI8 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CRLF3Q8IUI8 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CRLF3Q8IUI8 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CRLF3Q8IUI8 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CRLF3Q8IUI8 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CRLF3Q8IUI8 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.01■□□□□ 0.31
CRLF3Q8IUI8 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CRLF3Q8IUI8 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
CRLF3Q8IUI8 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CRLF3Q8IUI8 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CRLF3Q8IUI8 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17■□□□□ 0.31
CRLF3Q8IUI8 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CRLF3Q8IUI8 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17■□□□□ 0.31
CRLF3Q8IUI8 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CRLF3Q8IUI8 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CRLF3Q8IUI8 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CRLF3Q8IUI8 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CRLF3Q8IUI8 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CRLF3Q8IUI8 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CRLF3Q8IUI8 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CRLF3Q8IUI8 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17■□□□□ 0.31
CRLF3Q8IUI8 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CRLF3Q8IUI8 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
CRLF3Q8IUI8 AP003733.1-201ENST00000491725 852 ntBASIC17■□□□□ 0.31
CRLF3Q8IUI8 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17■□□□□ 0.31
CRLF3Q8IUI8 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17■□□□□ 0.31
CRLF3Q8IUI8 CLEC4GP1-201ENST00000596555 870 ntBASIC17■□□□□ 0.31
CRLF3Q8IUI8 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CRLF3Q8IUI8 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17■□□□□ 0.31
CRLF3Q8IUI8 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17■□□□□ 0.31
CRLF3Q8IUI8 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CRLF3Q8IUI8 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17■□□□□ 0.31
CRLF3Q8IUI8 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17■□□□□ 0.31
CRLF3Q8IUI8 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CRLF3Q8IUI8 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CRLF3Q8IUI8 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17■□□□□ 0.31
CRLF3Q8IUI8 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CRLF3Q8IUI8 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.99■□□□□ 0.31
CRLF3Q8IUI8 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CRLF3Q8IUI8 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.99■□□□□ 0.31
CRLF3Q8IUI8 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CRLF3Q8IUI8 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CRLF3Q8IUI8 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CRLF3Q8IUI8 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.99■□□□□ 0.31
CRLF3Q8IUI8 EGFEM1P-202ENST00000431685 1563 ntBASIC16.99■□□□□ 0.31
CRLF3Q8IUI8 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.99■□□□□ 0.31
CRLF3Q8IUI8 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CRLF3Q8IUI8 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CRLF3Q8IUI8 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CRLF3Q8IUI8 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CRLF3Q8IUI8 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CRLF3Q8IUI8 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CRLF3Q8IUI8 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.99■□□□□ 0.31
CRLF3Q8IUI8 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
CRLF3Q8IUI8 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CRLF3Q8IUI8 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CRLF3Q8IUI8 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CRLF3Q8IUI8 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CRLF3Q8IUI8 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CRLF3Q8IUI8 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CRLF3Q8IUI8 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CRLF3Q8IUI8 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CRLF3Q8IUI8 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CRLF3Q8IUI8 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.99■□□□□ 0.31
CRLF3Q8IUI8 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.99■□□□□ 0.31
CRLF3Q8IUI8 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.99■□□□□ 0.31
CRLF3Q8IUI8 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.99■□□□□ 0.31
CRLF3Q8IUI8 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CRLF3Q8IUI8 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
CRLF3Q8IUI8 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
CRLF3Q8IUI8 AC007950.2-201ENST00000615045 2347 ntBASIC16.99■□□□□ 0.31
CRLF3Q8IUI8 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.99■□□□□ 0.31
CRLF3Q8IUI8 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CRLF3Q8IUI8 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CRLF3Q8IUI8 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms