Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM50Q86XT4 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
TRIM50Q86XT4 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM50Q86XT4 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM50Q86XT4 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM50Q86XT4 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM50Q86XT4 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM50Q86XT4 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM50Q86XT4 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM50Q86XT4 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM50Q86XT4 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM50Q86XT4 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM50Q86XT4 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.87■□□□□ 0.61
TRIM50Q86XT4 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM50Q86XT4 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.87■□□□□ 0.61
TRIM50Q86XT4 AL627223.1-201ENST00000416693 442 ntBASIC18.87■□□□□ 0.61
TRIM50Q86XT4 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
TRIM50Q86XT4 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
TRIM50Q86XT4 FRMD8P1-201ENST00000440433 1524 ntBASIC18.87■□□□□ 0.61
TRIM50Q86XT4 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.87■□□□□ 0.61
TRIM50Q86XT4 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM50Q86XT4 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC18.87■□□□□ 0.61
TRIM50Q86XT4 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM50Q86XT4 DAD1-205ENST00000543337 501 ntTSL 3 BASIC18.87■□□□□ 0.61
TRIM50Q86XT4 AL135744.1-201ENST00000565098 629 ntBASIC18.87■□□□□ 0.61
TRIM50Q86XT4 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM50Q86XT4 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC18.87■□□□□ 0.61
TRIM50Q86XT4 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC18.87■□□□□ 0.61
TRIM50Q86XT4 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC18.87■□□□□ 0.61
TRIM50Q86XT4 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
TRIM50Q86XT4 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM50Q86XT4 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
TRIM50Q86XT4 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM50Q86XT4 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM50Q86XT4 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM50Q86XT4 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM50Q86XT4 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM50Q86XT4 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
TRIM50Q86XT4 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM50Q86XT4 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM50Q86XT4 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.86■□□□□ 0.61
TRIM50Q86XT4 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.86■□□□□ 0.61
TRIM50Q86XT4 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM50Q86XT4 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
TRIM50Q86XT4 AL353732.1-201ENST00000569618 1459 ntBASIC18.86■□□□□ 0.61
TRIM50Q86XT4 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC18.86■□□□□ 0.61
TRIM50Q86XT4 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
TRIM50Q86XT4 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.86■□□□□ 0.61
TRIM50Q86XT4 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM50Q86XT4 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC18.86■□□□□ 0.61
TRIM50Q86XT4 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM50Q86XT4 SPDYE11-202ENST00000450699 704 ntBASIC18.86■□□□□ 0.61
TRIM50Q86XT4 AC079140.1-201ENST00000508039 487 ntBASIC18.86■□□□□ 0.61
TRIM50Q86XT4 GATB-205ENST00000508611 605 ntTSL 2 BASIC18.86■□□□□ 0.61
TRIM50Q86XT4 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC18.86■□□□□ 0.61
TRIM50Q86XT4 AC004449.1-201ENST00000564240 433 ntBASIC18.86■□□□□ 0.61
TRIM50Q86XT4 SPDYE9P-201ENST00000570642 692 ntBASIC18.86■□□□□ 0.61
TRIM50Q86XT4 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC18.86■□□□□ 0.61
TRIM50Q86XT4 AL009183.1-201ENST00000603760 355 ntBASIC18.86■□□□□ 0.61
TRIM50Q86XT4 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM50Q86XT4 SPDYE10P-202ENST00000612005 668 ntBASIC18.86■□□□□ 0.61
TRIM50Q86XT4 SPDYE8P-202ENST00000612377 668 ntBASIC18.86■□□□□ 0.61
TRIM50Q86XT4 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC18.86■□□□□ 0.61
TRIM50Q86XT4 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM50Q86XT4 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM50Q86XT4 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM50Q86XT4 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM50Q86XT4 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.86■□□□□ 0.61
TRIM50Q86XT4 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
TRIM50Q86XT4 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC18.86■□□□□ 0.61
TRIM50Q86XT4 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM50Q86XT4 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM50Q86XT4 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM50Q86XT4 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM50Q86XT4 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.85■□□□□ 0.61
TRIM50Q86XT4 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
TRIM50Q86XT4 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
TRIM50Q86XT4 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM50Q86XT4 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM50Q86XT4 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM50Q86XT4 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
TRIM50Q86XT4 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
TRIM50Q86XT4 TOP3BP1-201ENST00000420768 1380 ntBASIC18.85■□□□□ 0.61
TRIM50Q86XT4 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM50Q86XT4 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
TRIM50Q86XT4 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
TRIM50Q86XT4 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM50Q86XT4 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC18.85■□□□□ 0.61
TRIM50Q86XT4 TFAMP1-201ENST00000412727 736 ntBASIC18.85■□□□□ 0.61
TRIM50Q86XT4 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC18.85■□□□□ 0.61
TRIM50Q86XT4 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC18.85■□□□□ 0.61
TRIM50Q86XT4 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.85■□□□□ 0.61
TRIM50Q86XT4 AC243562.1-201ENST00000560672 389 ntBASIC18.85■□□□□ 0.61
TRIM50Q86XT4 RARRES2P8-201ENST00000566335 367 ntBASIC18.85■□□□□ 0.61
TRIM50Q86XT4 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.85■□□□□ 0.61
TRIM50Q86XT4 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM50Q86XT4 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
TRIM50Q86XT4 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
TRIM50Q86XT4 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.85■□□□□ 0.61
TRIM50Q86XT4 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms