Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHMP1BQ7LBR1 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.75■□□□□ 0.11
CHMP1BQ7LBR1 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHMP1BQ7LBR1 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC15.75■□□□□ 0.11
CHMP1BQ7LBR1 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
CHMP1BQ7LBR1 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CHMP1BQ7LBR1 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHMP1BQ7LBR1 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHMP1BQ7LBR1 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CHMP1BQ7LBR1 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHMP1BQ7LBR1 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC15.75■□□□□ 0.11
CHMP1BQ7LBR1 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CHMP1BQ7LBR1 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHMP1BQ7LBR1 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
CHMP1BQ7LBR1 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
CHMP1BQ7LBR1 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CHMP1BQ7LBR1 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.75■□□□□ 0.11
CHMP1BQ7LBR1 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CHMP1BQ7LBR1 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CHMP1BQ7LBR1 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHMP1BQ7LBR1 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHMP1BQ7LBR1 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHMP1BQ7LBR1 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC15.74■□□□□ 0.11
CHMP1BQ7LBR1 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHMP1BQ7LBR1 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHMP1BQ7LBR1 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CHMP1BQ7LBR1 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CHMP1BQ7LBR1 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHMP1BQ7LBR1 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CHMP1BQ7LBR1 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CHMP1BQ7LBR1 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHMP1BQ7LBR1 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHMP1BQ7LBR1 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.74■□□□□ 0.11
CHMP1BQ7LBR1 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHMP1BQ7LBR1 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CHMP1BQ7LBR1 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CHMP1BQ7LBR1 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CHMP1BQ7LBR1 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.74■□□□□ 0.11
CHMP1BQ7LBR1 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CHMP1BQ7LBR1 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.74■□□□□ 0.11
CHMP1BQ7LBR1 STK19B-204ENST00000512515 211 ntBASIC15.74■□□□□ 0.11
CHMP1BQ7LBR1 OR7E14P-202ENST00000530490 1290 ntBASIC15.74■□□□□ 0.11
CHMP1BQ7LBR1 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.74■□□□□ 0.11
CHMP1BQ7LBR1 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.74■□□□□ 0.11
CHMP1BQ7LBR1 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CHMP1BQ7LBR1 SART3-203ENST00000546611 1184 ntBASIC15.74■□□□□ 0.11
CHMP1BQ7LBR1 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.74■□□□□ 0.11
CHMP1BQ7LBR1 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
CHMP1BQ7LBR1 MTDHP4-201ENST00000600287 670 ntBASIC15.74■□□□□ 0.11
CHMP1BQ7LBR1 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
CHMP1BQ7LBR1 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.74■□□□□ 0.11
CHMP1BQ7LBR1 AL022326.1-202ENST00000641533 845 ntBASIC15.74■□□□□ 0.11
CHMP1BQ7LBR1 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CHMP1BQ7LBR1 AC079776.2-201ENST00000641154 1609 ntBASIC15.74■□□□□ 0.11
CHMP1BQ7LBR1 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.74■□□□□ 0.11
CHMP1BQ7LBR1 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHMP1BQ7LBR1 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHMP1BQ7LBR1 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CHMP1BQ7LBR1 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
CHMP1BQ7LBR1 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.74■□□□□ 0.11
CHMP1BQ7LBR1 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CHMP1BQ7LBR1 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CHMP1BQ7LBR1 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.74■□□□□ 0.11
CHMP1BQ7LBR1 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.74■□□□□ 0.11
CHMP1BQ7LBR1 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CHMP1BQ7LBR1 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHMP1BQ7LBR1 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.73■□□□□ 0.11
CHMP1BQ7LBR1 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHMP1BQ7LBR1 HLA-DQB1-201ENST00000374943 1656 ntBASIC15.73■□□□□ 0.11
CHMP1BQ7LBR1 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHMP1BQ7LBR1 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.73■□□□□ 0.11
CHMP1BQ7LBR1 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHMP1BQ7LBR1 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
CHMP1BQ7LBR1 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHMP1BQ7LBR1 SIGLEC30P-201ENST00000455569 941 ntBASIC15.73■□□□□ 0.11
CHMP1BQ7LBR1 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHMP1BQ7LBR1 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.73■□□□□ 0.11
CHMP1BQ7LBR1 BX005266.1-201ENST00000473402 457 ntBASIC15.73■□□□□ 0.11
CHMP1BQ7LBR1 AC002558.1-201ENST00000488906 803 ntBASIC15.73■□□□□ 0.11
CHMP1BQ7LBR1 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.73■□□□□ 0.11
CHMP1BQ7LBR1 AC021087.4-201ENST00000563761 564 ntBASIC15.73■□□□□ 0.11
CHMP1BQ7LBR1 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.73■□□□□ 0.11
CHMP1BQ7LBR1 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.73■□□□□ 0.11
CHMP1BQ7LBR1 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.73■□□□□ 0.11
CHMP1BQ7LBR1 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CHMP1BQ7LBR1 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.73■□□□□ 0.11
CHMP1BQ7LBR1 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CHMP1BQ7LBR1 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC15.73■□□□□ 0.11
CHMP1BQ7LBR1 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHMP1BQ7LBR1 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CHMP1BQ7LBR1 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHMP1BQ7LBR1 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CHMP1BQ7LBR1 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
CHMP1BQ7LBR1 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
CHMP1BQ7LBR1 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHMP1BQ7LBR1 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHMP1BQ7LBR1 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CHMP1BQ7LBR1 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC15.73■□□□□ 0.11
CHMP1BQ7LBR1 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
CHMP1BQ7LBR1 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms