Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RFWD3Q6PCD5 AL121761.2-201ENST00000598007 1648 ntBASIC17.72■□□□□ 0.43
RFWD3Q6PCD5 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.72■□□□□ 0.43
RFWD3Q6PCD5 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.72■□□□□ 0.43
RFWD3Q6PCD5 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RFWD3Q6PCD5 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RFWD3Q6PCD5 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
RFWD3Q6PCD5 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.71■□□□□ 0.43
RFWD3Q6PCD5 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RFWD3Q6PCD5 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
RFWD3Q6PCD5 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RFWD3Q6PCD5 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.71■□□□□ 0.43
RFWD3Q6PCD5 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
RFWD3Q6PCD5 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
RFWD3Q6PCD5 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RFWD3Q6PCD5 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.71■□□□□ 0.43
RFWD3Q6PCD5 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
RFWD3Q6PCD5 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
RFWD3Q6PCD5 SLC25A1P3-201ENST00000395415 828 ntBASIC17.71■□□□□ 0.43
RFWD3Q6PCD5 MRPL20P1-201ENST00000400819 433 ntBASIC17.71■□□□□ 0.43
RFWD3Q6PCD5 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RFWD3Q6PCD5 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
RFWD3Q6PCD5 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.71■□□□□ 0.43
RFWD3Q6PCD5 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.71■□□□□ 0.43
RFWD3Q6PCD5 RNA5SP416-201ENST00000516838 111 ntBASIC17.71■□□□□ 0.43
RFWD3Q6PCD5 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.71■□□□□ 0.43
RFWD3Q6PCD5 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.71■□□□□ 0.43
RFWD3Q6PCD5 OR7E47P-204ENST00000575924 449 ntBASIC17.71■□□□□ 0.43
RFWD3Q6PCD5 GGTLC5P-201ENST00000617623 998 ntBASIC17.71■□□□□ 0.43
RFWD3Q6PCD5 AC023511.2-201ENST00000618803 211 ntBASIC17.71■□□□□ 0.43
RFWD3Q6PCD5 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RFWD3Q6PCD5 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
RFWD3Q6PCD5 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RFWD3Q6PCD5 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
RFWD3Q6PCD5 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RFWD3Q6PCD5 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RFWD3Q6PCD5 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
RFWD3Q6PCD5 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
RFWD3Q6PCD5 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RFWD3Q6PCD5 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
RFWD3Q6PCD5 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.7■□□□□ 0.42
RFWD3Q6PCD5 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
RFWD3Q6PCD5 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.7■□□□□ 0.42
RFWD3Q6PCD5 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
RFWD3Q6PCD5 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.7■□□□□ 0.42
RFWD3Q6PCD5 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
RFWD3Q6PCD5 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
RFWD3Q6PCD5 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
RFWD3Q6PCD5 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RFWD3Q6PCD5 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
RFWD3Q6PCD5 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
RFWD3Q6PCD5 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RFWD3Q6PCD5 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
RFWD3Q6PCD5 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RFWD3Q6PCD5 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RFWD3Q6PCD5 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RFWD3Q6PCD5 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RFWD3Q6PCD5 AC016396.2-201ENST00000562575 1417 ntBASIC17.7■□□□□ 0.42
RFWD3Q6PCD5 AL391005.1-201ENST00000623953 2435 ntBASIC17.7■□□□□ 0.42
RFWD3Q6PCD5 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
RFWD3Q6PCD5 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RFWD3Q6PCD5 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
RFWD3Q6PCD5 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
RFWD3Q6PCD5 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
RFWD3Q6PCD5 AC093525.9-201ENST00000624961 1746 ntBASIC17.69■□□□□ 0.42
RFWD3Q6PCD5 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.69■□□□□ 0.42
RFWD3Q6PCD5 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFWD3Q6PCD5 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
RFWD3Q6PCD5 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.69■□□□□ 0.42
RFWD3Q6PCD5 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RFWD3Q6PCD5 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
RFWD3Q6PCD5 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RFWD3Q6PCD5 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RFWD3Q6PCD5 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFWD3Q6PCD5 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFWD3Q6PCD5 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.69■□□□□ 0.42
RFWD3Q6PCD5 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFWD3Q6PCD5 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
RFWD3Q6PCD5 IGLL3P-201ENST00000412472 434 ntBASIC17.69■□□□□ 0.42
RFWD3Q6PCD5 PRSS29P-201ENST00000440800 595 ntBASIC17.69■□□□□ 0.42
RFWD3Q6PCD5 HCG4B-203ENST00000450128 991 ntBASIC17.69■□□□□ 0.42
RFWD3Q6PCD5 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.69■□□□□ 0.42
RFWD3Q6PCD5 AC018845.2-201ENST00000568326 409 ntBASIC17.69■□□□□ 0.42
RFWD3Q6PCD5 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
RFWD3Q6PCD5 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.69■□□□□ 0.42
RFWD3Q6PCD5 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
RFWD3Q6PCD5 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFWD3Q6PCD5 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.69■□□□□ 0.42
RFWD3Q6PCD5 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
RFWD3Q6PCD5 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.69■□□□□ 0.42
RFWD3Q6PCD5 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RFWD3Q6PCD5 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFWD3Q6PCD5 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFWD3Q6PCD5 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.69■□□□□ 0.42
RFWD3Q6PCD5 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFWD3Q6PCD5 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
RFWD3Q6PCD5 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RFWD3Q6PCD5 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RFWD3Q6PCD5 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RFWD3Q6PCD5 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms