Protein–RNA interactions for Protein: Q6FI13

HIST2H2AA3, Histone H2A type 2-A, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2AA3Q6FI13 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.43■□□□□ 0.22
HIST2H2AA3Q6FI13 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
HIST2H2AA3Q6FI13 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIST2H2AA3Q6FI13 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
HIST2H2AA3Q6FI13 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.43■□□□□ 0.22
HIST2H2AA3Q6FI13 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIST2H2AA3Q6FI13 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIST2H2AA3Q6FI13 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIST2H2AA3Q6FI13 NKILA-202ENST00000614771 2598 ntBASIC16.42■□□□□ 0.22
HIST2H2AA3Q6FI13 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HIST2H2AA3Q6FI13 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIST2H2AA3Q6FI13 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.42■□□□□ 0.22
HIST2H2AA3Q6FI13 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIST2H2AA3Q6FI13 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIST2H2AA3Q6FI13 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
HIST2H2AA3Q6FI13 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
HIST2H2AA3Q6FI13 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.42■□□□□ 0.22
HIST2H2AA3Q6FI13 AC243591.1-201ENST00000452967 1364 ntBASIC16.42■□□□□ 0.22
HIST2H2AA3Q6FI13 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIST2H2AA3Q6FI13 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.42■□□□□ 0.22
HIST2H2AA3Q6FI13 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
HIST2H2AA3Q6FI13 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIST2H2AA3Q6FI13 AC106886.4-201ENST00000623557 2502 ntBASIC16.42■□□□□ 0.22
HIST2H2AA3Q6FI13 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIST2H2AA3Q6FI13 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.42■□□□□ 0.22
HIST2H2AA3Q6FI13 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.42■□□□□ 0.22
HIST2H2AA3Q6FI13 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.42■□□□□ 0.22
HIST2H2AA3Q6FI13 LAGE3P1-201ENST00000425356 484 ntBASIC16.42■□□□□ 0.22
HIST2H2AA3Q6FI13 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.42■□□□□ 0.22
HIST2H2AA3Q6FI13 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.42■□□□□ 0.22
HIST2H2AA3Q6FI13 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.42■□□□□ 0.22
HIST2H2AA3Q6FI13 TERC-201ENST00000602385 541 ntBASIC16.42■□□□□ 0.22
HIST2H2AA3Q6FI13 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.42■□□□□ 0.22
HIST2H2AA3Q6FI13 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.42■□□□□ 0.22
HIST2H2AA3Q6FI13 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIST2H2AA3Q6FI13 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIST2H2AA3Q6FI13 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
HIST2H2AA3Q6FI13 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HIST2H2AA3Q6FI13 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIST2H2AA3Q6FI13 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
HIST2H2AA3Q6FI13 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
HIST2H2AA3Q6FI13 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIST2H2AA3Q6FI13 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIST2H2AA3Q6FI13 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIST2H2AA3Q6FI13 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
HIST2H2AA3Q6FI13 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIST2H2AA3Q6FI13 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
HIST2H2AA3Q6FI13 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.42■□□□□ 0.22
HIST2H2AA3Q6FI13 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIST2H2AA3Q6FI13 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIST2H2AA3Q6FI13 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.42■□□□□ 0.22
HIST2H2AA3Q6FI13 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIST2H2AA3Q6FI13 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HIST2H2AA3Q6FI13 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HIST2H2AA3Q6FI13 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.41■□□□□ 0.22
HIST2H2AA3Q6FI13 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.41■□□□□ 0.22
HIST2H2AA3Q6FI13 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HIST2H2AA3Q6FI13 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HIST2H2AA3Q6FI13 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.41■□□□□ 0.22
HIST2H2AA3Q6FI13 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
HIST2H2AA3Q6FI13 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HIST2H2AA3Q6FI13 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.41■□□□□ 0.22
HIST2H2AA3Q6FI13 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.41■□□□□ 0.22
HIST2H2AA3Q6FI13 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.41■□□□□ 0.22
HIST2H2AA3Q6FI13 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.41■□□□□ 0.22
HIST2H2AA3Q6FI13 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.41■□□□□ 0.22
HIST2H2AA3Q6FI13 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.41■□□□□ 0.22
HIST2H2AA3Q6FI13 UNC93B7-201ENST00000509439 705 ntBASIC16.41■□□□□ 0.22
HIST2H2AA3Q6FI13 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.41■□□□□ 0.22
HIST2H2AA3Q6FI13 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.41■□□□□ 0.22
HIST2H2AA3Q6FI13 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.41■□□□□ 0.22
HIST2H2AA3Q6FI13 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.41■□□□□ 0.22
HIST2H2AA3Q6FI13 AC025062.2-201ENST00000605477 670 ntBASIC16.41■□□□□ 0.22
HIST2H2AA3Q6FI13 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.41■□□□□ 0.22
HIST2H2AA3Q6FI13 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HIST2H2AA3Q6FI13 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.41■□□□□ 0.22
HIST2H2AA3Q6FI13 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HIST2H2AA3Q6FI13 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HIST2H2AA3Q6FI13 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
HIST2H2AA3Q6FI13 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.41■□□□□ 0.22
HIST2H2AA3Q6FI13 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.41■□□□□ 0.22
HIST2H2AA3Q6FI13 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HIST2H2AA3Q6FI13 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HIST2H2AA3Q6FI13 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HIST2H2AA3Q6FI13 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
HIST2H2AA3Q6FI13 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.41■□□□□ 0.22
HIST2H2AA3Q6FI13 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HIST2H2AA3Q6FI13 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
HIST2H2AA3Q6FI13 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.41■□□□□ 0.22
HIST2H2AA3Q6FI13 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
HIST2H2AA3Q6FI13 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HIST2H2AA3Q6FI13 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HIST2H2AA3Q6FI13 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
HIST2H2AA3Q6FI13 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.4■□□□□ 0.22
HIST2H2AA3Q6FI13 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.4■□□□□ 0.22
HIST2H2AA3Q6FI13 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HIST2H2AA3Q6FI13 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.4■□□□□ 0.22
HIST2H2AA3Q6FI13 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
HIST2H2AA3Q6FI13 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HIST2H2AA3Q6FI13 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms