Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
RNF43Q68DV7 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.84■□□□□ 0.45
RNF43Q68DV7 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF43Q68DV7 PCDHA14-201ENST00000506751 2298 ntBASIC17.84■□□□□ 0.45
RNF43Q68DV7 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RNF43Q68DV7 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF43Q68DV7 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.84■□□□□ 0.45
RNF43Q68DV7 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RNF43Q68DV7 DOC2GP-204ENST00000639052 2548 ntBASIC17.83■□□□□ 0.45
RNF43Q68DV7 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.83■□□□□ 0.45
RNF43Q68DV7 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
RNF43Q68DV7 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
RNF43Q68DV7 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RNF43Q68DV7 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
RNF43Q68DV7 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
RNF43Q68DV7 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
RNF43Q68DV7 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RNF43Q68DV7 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RNF43Q68DV7 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
RNF43Q68DV7 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
RNF43Q68DV7 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RNF43Q68DV7 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF43Q68DV7 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.83■□□□□ 0.44
RNF43Q68DV7 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
RNF43Q68DV7 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF43Q68DV7 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF43Q68DV7 AC211486.1-202ENST00000416371 468 ntBASIC17.83■□□□□ 0.44
RNF43Q68DV7 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.83■□□□□ 0.44
RNF43Q68DV7 AC211476.1-201ENST00000503899 468 ntBASIC17.83■□□□□ 0.44
RNF43Q68DV7 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.83■□□□□ 0.44
RNF43Q68DV7 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.83■□□□□ 0.44
RNF43Q68DV7 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
RNF43Q68DV7 AL805961.1-202ENST00000641562 540 ntBASIC17.83■□□□□ 0.44
RNF43Q68DV7 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.83■□□□□ 0.44
RNF43Q68DV7 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF43Q68DV7 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
RNF43Q68DV7 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF43Q68DV7 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.83■□□□□ 0.44
RNF43Q68DV7 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF43Q68DV7 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.83■□□□□ 0.44
RNF43Q68DV7 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF43Q68DV7 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
RNF43Q68DV7 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF43Q68DV7 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.83■□□□□ 0.44
RNF43Q68DV7 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
RNF43Q68DV7 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
RNF43Q68DV7 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
RNF43Q68DV7 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.82■□□□□ 0.44
RNF43Q68DV7 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RNF43Q68DV7 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RNF43Q68DV7 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF43Q68DV7 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RNF43Q68DV7 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
RNF43Q68DV7 KRT18P28-201ENST00000453838 1332 ntBASIC17.82■□□□□ 0.44
RNF43Q68DV7 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.82■□□□□ 0.44
RNF43Q68DV7 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF43Q68DV7 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RNF43Q68DV7 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF43Q68DV7 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
RNF43Q68DV7 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF43Q68DV7 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
RNF43Q68DV7 LINC00982-205ENST00000420957 435 ntBASIC17.82■□□□□ 0.44
RNF43Q68DV7 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.82■□□□□ 0.44
RNF43Q68DV7 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.82■□□□□ 0.44
RNF43Q68DV7 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.82■□□□□ 0.44
RNF43Q68DV7 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.82■□□□□ 0.44
RNF43Q68DV7 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RNF43Q68DV7 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.82■□□□□ 0.44
RNF43Q68DV7 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF43Q68DV7 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF43Q68DV7 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.82■□□□□ 0.44
RNF43Q68DV7 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF43Q68DV7 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
RNF43Q68DV7 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.82■□□□□ 0.44
RNF43Q68DV7 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RNF43Q68DV7 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RNF43Q68DV7 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF43Q68DV7 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF43Q68DV7 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF43Q68DV7 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF43Q68DV7 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.81■□□□□ 0.44
RNF43Q68DV7 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF43Q68DV7 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF43Q68DV7 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF43Q68DV7 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.81■□□□□ 0.44
RNF43Q68DV7 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.81■□□□□ 0.44
RNF43Q68DV7 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.81■□□□□ 0.44
RNF43Q68DV7 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
RNF43Q68DV7 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.81■□□□□ 0.44
RNF43Q68DV7 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
RNF43Q68DV7 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF43Q68DV7 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF43Q68DV7 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
RNF43Q68DV7 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF43Q68DV7 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.81■□□□□ 0.44
RNF43Q68DV7 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF43Q68DV7 AC007967.2-201ENST00000432613 625 ntBASIC17.81■□□□□ 0.44
RNF43Q68DV7 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF43Q68DV7 IGHV3-65-201ENST00000523210 341 ntBASIC17.81■□□□□ 0.44
RNF43Q68DV7 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms