Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ATPAF1Q5TC12 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
ATPAF1Q5TC12 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
ATPAF1Q5TC12 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ATPAF1Q5TC12 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC14.79□□□□□ -0.04
ATPAF1Q5TC12 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
ATPAF1Q5TC12 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ATPAF1Q5TC12 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.79□□□□□ -0.04
ATPAF1Q5TC12 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ATPAF1Q5TC12 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ATPAF1Q5TC12 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC14.79□□□□□ -0.04
ATPAF1Q5TC12 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ATPAF1Q5TC12 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ATPAF1Q5TC12 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC14.79□□□□□ -0.04
ATPAF1Q5TC12 CTNS-203ENST00000399306 803 ntTSL 3 BASIC14.79□□□□□ -0.04
ATPAF1Q5TC12 RNF216P1-203ENST00000404404 2427 ntBASIC14.79□□□□□ -0.04
ATPAF1Q5TC12 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
ATPAF1Q5TC12 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ATPAF1Q5TC12 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC14.79□□□□□ -0.04
ATPAF1Q5TC12 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
ATPAF1Q5TC12 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
ATPAF1Q5TC12 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC14.79□□□□□ -0.04
ATPAF1Q5TC12 AC103564.2-201ENST00000432853 1299 ntBASIC14.79□□□□□ -0.04
ATPAF1Q5TC12 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
ATPAF1Q5TC12 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC14.79□□□□□ -0.04
ATPAF1Q5TC12 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ATPAF1Q5TC12 BET1L-206ENST00000486280 665 ntTSL 3 BASIC14.79□□□□□ -0.04
ATPAF1Q5TC12 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ATPAF1Q5TC12 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
ATPAF1Q5TC12 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC14.79□□□□□ -0.04
ATPAF1Q5TC12 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
ATPAF1Q5TC12 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.79□□□□□ -0.04
ATPAF1Q5TC12 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC14.79□□□□□ -0.04
ATPAF1Q5TC12 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
ATPAF1Q5TC12 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ATPAF1Q5TC12 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC14.79□□□□□ -0.04
ATPAF1Q5TC12 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC14.79□□□□□ -0.04
ATPAF1Q5TC12 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC14.79□□□□□ -0.04
ATPAF1Q5TC12 BNIP3P18-201ENST00000593976 575 ntBASIC14.79□□□□□ -0.04
ATPAF1Q5TC12 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
ATPAF1Q5TC12 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.79□□□□□ -0.04
ATPAF1Q5TC12 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ATPAF1Q5TC12 CCNC-219ENST00000627680 896 ntTSL 5 BASIC14.79□□□□□ -0.04
ATPAF1Q5TC12 TP73-AS1-210ENST00000637775 1455 ntBASIC14.79□□□□□ -0.04
ATPAF1Q5TC12 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
ATPAF1Q5TC12 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.79□□□□□ -0.04
ATPAF1Q5TC12 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ATPAF1Q5TC12 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ATPAF1Q5TC12 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
ATPAF1Q5TC12 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ATPAF1Q5TC12 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
ATPAF1Q5TC12 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ATPAF1Q5TC12 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ATPAF1Q5TC12 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ATPAF1Q5TC12 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.78□□□□□ -0.04
ATPAF1Q5TC12 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
ATPAF1Q5TC12 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ATPAF1Q5TC12 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.78□□□□□ -0.04
ATPAF1Q5TC12 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
ATPAF1Q5TC12 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
ATPAF1Q5TC12 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ATPAF1Q5TC12 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ATPAF1Q5TC12 AC079328.2-201ENST00000561241 3354 ntBASIC14.78□□□□□ -0.04
ATPAF1Q5TC12 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC14.78□□□□□ -0.04
ATPAF1Q5TC12 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ATPAF1Q5TC12 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC14.78□□□□□ -0.04
ATPAF1Q5TC12 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.78□□□□□ -0.04
ATPAF1Q5TC12 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ATPAF1Q5TC12 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ATPAF1Q5TC12 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ATPAF1Q5TC12 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC14.78□□□□□ -0.04
ATPAF1Q5TC12 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ATPAF1Q5TC12 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC14.78□□□□□ -0.04
ATPAF1Q5TC12 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC14.78□□□□□ -0.04
ATPAF1Q5TC12 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
ATPAF1Q5TC12 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.78□□□□□ -0.04
ATPAF1Q5TC12 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ATPAF1Q5TC12 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ATPAF1Q5TC12 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ATPAF1Q5TC12 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
ATPAF1Q5TC12 AC005104.2-201ENST00000427818 678 ntBASIC14.78□□□□□ -0.04
ATPAF1Q5TC12 KRT16P4-201ENST00000453883 522 ntBASIC14.78□□□□□ -0.04
ATPAF1Q5TC12 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC14.78□□□□□ -0.04
ATPAF1Q5TC12 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC14.78□□□□□ -0.04
ATPAF1Q5TC12 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC14.78□□□□□ -0.04
ATPAF1Q5TC12 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ATPAF1Q5TC12 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC14.78□□□□□ -0.04
ATPAF1Q5TC12 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC14.78□□□□□ -0.04
ATPAF1Q5TC12 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ATPAF1Q5TC12 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC14.78□□□□□ -0.04
ATPAF1Q5TC12 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ATPAF1Q5TC12 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
ATPAF1Q5TC12 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
ATPAF1Q5TC12 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ATPAF1Q5TC12 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ATPAF1Q5TC12 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ATPAF1Q5TC12 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
ATPAF1Q5TC12 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ATPAF1Q5TC12 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ATPAF1Q5TC12 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms