Protein–RNA interactions for Protein: Q567U6

CCDC93, Coiled-coil domain-containing protein 93, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93Q567U6 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC93Q567U6 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
CCDC93Q567U6 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC93Q567U6 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.91
CCDC93Q567U6 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.91
CCDC93Q567U6 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC20.7■□□□□ 0.91
CCDC93Q567U6 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC93Q567U6 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC93Q567U6 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC20.7■□□□□ 0.9
CCDC93Q567U6 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC93Q567U6 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC93Q567U6 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC93Q567U6 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC93Q567U6 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC93Q567U6 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC93Q567U6 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC93Q567U6 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC93Q567U6 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC20.7■□□□□ 0.9
CCDC93Q567U6 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC93Q567U6 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC20.7■□□□□ 0.9
CCDC93Q567U6 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC93Q567U6 AC091167.2-201ENST00000579581 588 ntBASIC20.7■□□□□ 0.9
CCDC93Q567U6 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC93Q567U6 AL138828.2-201ENST00000615812 383 ntBASIC20.7■□□□□ 0.9
CCDC93Q567U6 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC93Q567U6 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
CCDC93Q567U6 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC93Q567U6 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC93Q567U6 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC93Q567U6 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC93Q567U6 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CCDC93Q567U6 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC93Q567U6 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC93Q567U6 AC139713.2-201ENST00000641328 2723 ntBASIC20.69■□□□□ 0.9
CCDC93Q567U6 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC93Q567U6 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC93Q567U6 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC93Q567U6 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC93Q567U6 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CCDC93Q567U6 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CCDC93Q567U6 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC20.69■□□□□ 0.9
CCDC93Q567U6 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC93Q567U6 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC93Q567U6 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CCDC93Q567U6 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC93Q567U6 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC93Q567U6 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC20.69■□□□□ 0.9
CCDC93Q567U6 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC93Q567U6 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC93Q567U6 ARSEP1-201ENST00000420443 635 ntBASIC20.69■□□□□ 0.9
CCDC93Q567U6 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC20.69■□□□□ 0.9
CCDC93Q567U6 TMPRSS11CP-201ENST00000453277 683 ntBASIC20.69■□□□□ 0.9
CCDC93Q567U6 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC20.69■□□□□ 0.9
CCDC93Q567U6 RARRES2P9-201ENST00000565168 469 ntBASIC20.69■□□□□ 0.9
CCDC93Q567U6 AL138918.1-201ENST00000568306 659 ntBASIC20.69■□□□□ 0.9
CCDC93Q567U6 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC93Q567U6 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC93Q567U6 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC20.69■□□□□ 0.9
CCDC93Q567U6 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CCDC93Q567U6 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC93Q567U6 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC93Q567U6 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC93Q567U6 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC93Q567U6 CD276-201ENST00000318424 2738 ntTSL 5 BASIC20.69■□□□□ 0.9
CCDC93Q567U6 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC93Q567U6 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC93Q567U6 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC93Q567U6 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC93Q567U6 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC93Q567U6 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC93Q567U6 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC93Q567U6 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC20.68■□□□□ 0.9
CCDC93Q567U6 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC93Q567U6 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC93Q567U6 SLC22A20-204ENST00000530038 1673 ntBASIC20.68■□□□□ 0.9
CCDC93Q567U6 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC20.68■□□□□ 0.9
CCDC93Q567U6 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC20.68■□□□□ 0.9
CCDC93Q567U6 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC93Q567U6 AC142381.1-201ENST00000426099 345 ntBASIC20.68■□□□□ 0.9
CCDC93Q567U6 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC93Q567U6 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC20.68■□□□□ 0.9
CCDC93Q567U6 REEP4-207ENST00000523293 913 ntTSL 3 BASIC20.68■□□□□ 0.9
CCDC93Q567U6 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC20.68■□□□□ 0.9
CCDC93Q567U6 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC20.68■□□□□ 0.9
CCDC93Q567U6 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC20.68■□□□□ 0.9
CCDC93Q567U6 AC003101.2-201ENST00000612557 442 ntBASIC20.68■□□□□ 0.9
CCDC93Q567U6 AC007967.4-201ENST00000614700 386 ntBASIC20.68■□□□□ 0.9
CCDC93Q567U6 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC20.68■□□□□ 0.9
CCDC93Q567U6 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC93Q567U6 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.68■□□□□ 0.9
CCDC93Q567U6 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC93Q567U6 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC93Q567U6 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC93Q567U6 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC93Q567U6 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC93Q567U6 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
CCDC93Q567U6 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC93Q567U6 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC93Q567U6 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC93Q567U6 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms