Protein–RNA interactions for Protein: Q53S08

RAB6C, Rab6C, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6CQ53S08 AC034105.1-201ENST00000563488 319 ntBASIC17.62■□□□□ 0.41
RAB6CQ53S08 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.62■□□□□ 0.41
RAB6CQ53S08 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RAB6CQ53S08 TUBB8P12-201ENST00000308911 1335 ntBASIC17.62■□□□□ 0.41
RAB6CQ53S08 TUBB7P-202ENST00000428444 1305 ntBASIC17.62■□□□□ 0.41
RAB6CQ53S08 TUBB8P7-204ENST00000567960 1332 ntBASIC17.62■□□□□ 0.41
RAB6CQ53S08 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RAB6CQ53S08 HLA-A-202ENST00000376806 1854 ntBASIC17.62■□□□□ 0.41
RAB6CQ53S08 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.62■□□□□ 0.41
RAB6CQ53S08 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAB6CQ53S08 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.62■□□□□ 0.41
RAB6CQ53S08 TOP3BP1-201ENST00000420768 1380 ntBASIC17.62■□□□□ 0.41
RAB6CQ53S08 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.62■□□□□ 0.41
RAB6CQ53S08 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RAB6CQ53S08 AC104109.2-201ENST00000602919 1418 ntBASIC17.62■□□□□ 0.41
RAB6CQ53S08 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RAB6CQ53S08 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.62■□□□□ 0.41
RAB6CQ53S08 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.62■□□□□ 0.41
RAB6CQ53S08 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RAB6CQ53S08 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RAB6CQ53S08 PCDH8P1-201ENST00000428983 2773 ntBASIC17.62■□□□□ 0.41
RAB6CQ53S08 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAB6CQ53S08 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAB6CQ53S08 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAB6CQ53S08 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB6CQ53S08 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB6CQ53S08 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB6CQ53S08 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.61■□□□□ 0.41
RAB6CQ53S08 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RAB6CQ53S08 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
RAB6CQ53S08 AL590627.1-203ENST00000421194 1026 ntBASIC17.61■□□□□ 0.41
RAB6CQ53S08 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.61■□□□□ 0.41
RAB6CQ53S08 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.61■□□□□ 0.41
RAB6CQ53S08 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.61■□□□□ 0.41
RAB6CQ53S08 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.61■□□□□ 0.41
RAB6CQ53S08 MIR4751-201ENST00000578027 74 ntBASIC17.61■□□□□ 0.41
RAB6CQ53S08 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.61■□□□□ 0.41
RAB6CQ53S08 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.61■□□□□ 0.41
RAB6CQ53S08 ACTL9-202ENST00000612068 1252 ntBASIC17.61■□□□□ 0.41
RAB6CQ53S08 GGTLC5P-201ENST00000617623 998 ntBASIC17.61■□□□□ 0.41
RAB6CQ53S08 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.61■□□□□ 0.41
RAB6CQ53S08 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.61■□□□□ 0.41
RAB6CQ53S08 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RAB6CQ53S08 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB6CQ53S08 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
RAB6CQ53S08 AL021920.2-201ENST00000624828 1351 ntBASIC17.61■□□□□ 0.41
RAB6CQ53S08 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RAB6CQ53S08 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB6CQ53S08 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RAB6CQ53S08 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB6CQ53S08 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.61■□□□□ 0.41
RAB6CQ53S08 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB6CQ53S08 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RAB6CQ53S08 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
RAB6CQ53S08 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RAB6CQ53S08 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.6■□□□□ 0.41
RAB6CQ53S08 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
RAB6CQ53S08 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.6■□□□□ 0.41
RAB6CQ53S08 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
RAB6CQ53S08 AC124067.4-201ENST00000519691 2379 ntBASIC17.6■□□□□ 0.41
RAB6CQ53S08 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RAB6CQ53S08 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.6■□□□□ 0.41
RAB6CQ53S08 AL662844.4-201ENST00000606367 2838 ntBASIC17.6■□□□□ 0.41
RAB6CQ53S08 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAB6CQ53S08 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RAB6CQ53S08 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.6■□□□□ 0.41
RAB6CQ53S08 MRPL20P1-201ENST00000400819 433 ntBASIC17.6■□□□□ 0.41
RAB6CQ53S08 RPL13AP23-201ENST00000480739 586 ntBASIC17.6■□□□□ 0.41
RAB6CQ53S08 AC093909.1-201ENST00000504731 1122 ntBASIC17.6■□□□□ 0.41
RAB6CQ53S08 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.6■□□□□ 0.41
RAB6CQ53S08 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RAB6CQ53S08 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RAB6CQ53S08 MIR4492-201ENST00000581627 80 ntBASIC17.6■□□□□ 0.41
RAB6CQ53S08 AC120114.3-201ENST00000611923 658 ntBASIC17.6■□□□□ 0.41
RAB6CQ53S08 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.6■□□□□ 0.41
RAB6CQ53S08 PGM5P2-202ENST00000637225 1043 ntBASIC17.6■□□□□ 0.41
RAB6CQ53S08 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.6■□□□□ 0.41
RAB6CQ53S08 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAB6CQ53S08 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RAB6CQ53S08 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RAB6CQ53S08 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.6■□□□□ 0.41
RAB6CQ53S08 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.6■□□□□ 0.41
RAB6CQ53S08 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.6■□□□□ 0.41
RAB6CQ53S08 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RAB6CQ53S08 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAB6CQ53S08 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAB6CQ53S08 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RAB6CQ53S08 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAB6CQ53S08 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.59■□□□□ 0.41
RAB6CQ53S08 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAB6CQ53S08 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAB6CQ53S08 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.59■□□□□ 0.41
RAB6CQ53S08 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RAB6CQ53S08 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAB6CQ53S08 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAB6CQ53S08 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.59■□□□□ 0.41
RAB6CQ53S08 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RAB6CQ53S08 AC006277.1-201ENST00000624348 1610 ntBASIC17.59■□□□□ 0.41
RAB6CQ53S08 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RAB6CQ53S08 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms