Protein–RNA interactions for Protein: Q49MI3

CERKL, Ceramide kinase-like protein, humanhuman

Predicted RBP Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKLQ49MI3 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19.75■□□□□ 0.75
CERKLQ49MI3 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CERKLQ49MI3 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
CERKLQ49MI3 CDK2AP2P3-201ENST00000422476 372 ntBASIC19.75■□□□□ 0.75
CERKLQ49MI3 RBPMS2P1-201ENST00000437762 623 ntBASIC19.75■□□□□ 0.75
CERKLQ49MI3 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CERKLQ49MI3 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CERKLQ49MI3 VPS29-207ENST00000549970 818 ntTSL 3 BASIC19.75■□□□□ 0.75
CERKLQ49MI3 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
CERKLQ49MI3 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC19.75■□□□□ 0.75
CERKLQ49MI3 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CERKLQ49MI3 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CERKLQ49MI3 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CERKLQ49MI3 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
CERKLQ49MI3 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CERKLQ49MI3 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CERKLQ49MI3 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CERKLQ49MI3 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CERKLQ49MI3 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CERKLQ49MI3 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CERKLQ49MI3 AC090340.1-201ENST00000620778 4980 ntBASIC19.75■□□□□ 0.75
CERKLQ49MI3 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CERKLQ49MI3 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CERKLQ49MI3 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC19.75■□□□□ 0.75
CERKLQ49MI3 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC19.75■□□□□ 0.75
CERKLQ49MI3 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC19.75■□□□□ 0.75
CERKLQ49MI3 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CERKLQ49MI3 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CERKLQ49MI3 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC19.74■□□□□ 0.75
CERKLQ49MI3 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC19.74■□□□□ 0.75
CERKLQ49MI3 AC108860.2-201ENST00000562760 2183 ntBASIC19.74■□□□□ 0.75
CERKLQ49MI3 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CERKLQ49MI3 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19.74■□□□□ 0.75
CERKLQ49MI3 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CERKLQ49MI3 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CERKLQ49MI3 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC19.74■□□□□ 0.75
CERKLQ49MI3 RPL30-202ENST00000396070 440 ntTSL 2 BASIC19.74■□□□□ 0.75
CERKLQ49MI3 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CERKLQ49MI3 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC19.74■□□□□ 0.75
CERKLQ49MI3 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC19.74■□□□□ 0.75
CERKLQ49MI3 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
CERKLQ49MI3 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC19.74■□□□□ 0.75
CERKLQ49MI3 AC124947.2-201ENST00000547118 1133 ntBASIC19.74■□□□□ 0.75
CERKLQ49MI3 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC19.74■□□□□ 0.75
CERKLQ49MI3 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.74■□□□□ 0.75
CERKLQ49MI3 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC19.74■□□□□ 0.75
CERKLQ49MI3 AC011467.4-201ENST00000594891 528 ntBASIC19.74■□□□□ 0.75
CERKLQ49MI3 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC19.74■□□□□ 0.75
CERKLQ49MI3 AP001059.3-201ENST00000619053 235 ntBASIC19.74■□□□□ 0.75
CERKLQ49MI3 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC19.74■□□□□ 0.75
CERKLQ49MI3 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CERKLQ49MI3 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.74■□□□□ 0.75
CERKLQ49MI3 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.74■□□□□ 0.75
CERKLQ49MI3 SLC9A3P2-201ENST00000447821 2021 ntBASIC19.74■□□□□ 0.75
CERKLQ49MI3 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CERKLQ49MI3 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CERKLQ49MI3 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CERKLQ49MI3 AC092053.1-201ENST00000605787 1936 ntBASIC19.74■□□□□ 0.75
CERKLQ49MI3 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CERKLQ49MI3 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CERKLQ49MI3 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CERKLQ49MI3 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CERKLQ49MI3 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CERKLQ49MI3 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CERKLQ49MI3 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CERKLQ49MI3 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CERKLQ49MI3 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CERKLQ49MI3 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CERKLQ49MI3 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CERKLQ49MI3 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CERKLQ49MI3 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CERKLQ49MI3 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC19.73■□□□□ 0.75
CERKLQ49MI3 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CERKLQ49MI3 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CERKLQ49MI3 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC19.73■□□□□ 0.75
CERKLQ49MI3 AC016027.1-202ENST00000607927 1699 ntBASIC19.73■□□□□ 0.75
CERKLQ49MI3 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CERKLQ49MI3 CD99-202ENST00000381180 530 ntTSL 2 BASIC19.73■□□□□ 0.75
CERKLQ49MI3 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CERKLQ49MI3 STARD13-205ENST00000439831 945 ntTSL 2 BASIC19.73■□□□□ 0.75
CERKLQ49MI3 AC067863.1-201ENST00000494933 530 ntBASIC19.73■□□□□ 0.75
CERKLQ49MI3 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC19.73■□□□□ 0.75
CERKLQ49MI3 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC19.73■□□□□ 0.75
CERKLQ49MI3 AL512356.2-201ENST00000546955 174 ntBASIC19.73■□□□□ 0.75
CERKLQ49MI3 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CERKLQ49MI3 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CERKLQ49MI3 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC19.73■□□□□ 0.75
CERKLQ49MI3 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC19.73■□□□□ 0.75
CERKLQ49MI3 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC19.73■□□□□ 0.75
CERKLQ49MI3 AC008267.7-201ENST00000624570 1194 ntBASIC19.73■□□□□ 0.75
CERKLQ49MI3 AC084121.4-201ENST00000641598 221 ntBASIC19.73■□□□□ 0.75
CERKLQ49MI3 AF228730.8-201ENST00000642140 221 ntBASIC19.73■□□□□ 0.75
CERKLQ49MI3 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CERKLQ49MI3 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CERKLQ49MI3 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CERKLQ49MI3 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CERKLQ49MI3 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CERKLQ49MI3 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CERKLQ49MI3 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CERKLQ49MI3 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms