Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC20.2■□□□□ 0.82
PDS5AQ29RF7 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC20.2■□□□□ 0.82
PDS5AQ29RF7 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PDS5AQ29RF7 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDS5AQ29RF7 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDS5AQ29RF7 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC20.19■□□□□ 0.82
PDS5AQ29RF7 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC20.19■□□□□ 0.82
PDS5AQ29RF7 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
PDS5AQ29RF7 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
PDS5AQ29RF7 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDS5AQ29RF7 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC20.19■□□□□ 0.82
PDS5AQ29RF7 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDS5AQ29RF7 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
PDS5AQ29RF7 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDS5AQ29RF7 KRT8P39-201ENST00000396270 1433 ntBASIC20.19■□□□□ 0.82
PDS5AQ29RF7 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDS5AQ29RF7 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDS5AQ29RF7 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
PDS5AQ29RF7 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
PDS5AQ29RF7 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
PDS5AQ29RF7 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC20.19■□□□□ 0.82
PDS5AQ29RF7 KRT18P34-201ENST00000488218 1270 ntBASIC20.19■□□□□ 0.82
PDS5AQ29RF7 AC105233.2-201ENST00000523697 349 ntBASIC20.19■□□□□ 0.82
PDS5AQ29RF7 AF228730.5-201ENST00000530288 346 ntBASIC20.19■□□□□ 0.82
PDS5AQ29RF7 AC069262.1-201ENST00000539058 672 ntBASIC20.19■□□□□ 0.82
PDS5AQ29RF7 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDS5AQ29RF7 AC106028.4-201ENST00000614509 607 ntBASIC20.19■□□□□ 0.82
PDS5AQ29RF7 Z92544.3-201ENST00000624747 417 ntBASIC20.19■□□□□ 0.82
PDS5AQ29RF7 RAB34-224ENST00000636513 888 ntTSL 5 BASIC20.19■□□□□ 0.82
PDS5AQ29RF7 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDS5AQ29RF7 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
PDS5AQ29RF7 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDS5AQ29RF7 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PDS5AQ29RF7 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
PDS5AQ29RF7 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC20.19■□□□□ 0.82
PDS5AQ29RF7 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PDS5AQ29RF7 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.18■□□□□ 0.82
PDS5AQ29RF7 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PDS5AQ29RF7 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDS5AQ29RF7 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDS5AQ29RF7 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDS5AQ29RF7 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDS5AQ29RF7 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC20.18■□□□□ 0.82
PDS5AQ29RF7 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PDS5AQ29RF7 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
PDS5AQ29RF7 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PDS5AQ29RF7 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PDS5AQ29RF7 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC20.18■□□□□ 0.82
PDS5AQ29RF7 AC092068.3-201ENST00000587894 2016 ntBASIC20.18■□□□□ 0.82
PDS5AQ29RF7 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC20.18■□□□□ 0.82
PDS5AQ29RF7 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PDS5AQ29RF7 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
PDS5AQ29RF7 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC20.18■□□□□ 0.82
PDS5AQ29RF7 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PDS5AQ29RF7 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PDS5AQ29RF7 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
PDS5AQ29RF7 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC20.18■□□□□ 0.82
PDS5AQ29RF7 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC20.18■□□□□ 0.82
PDS5AQ29RF7 SLC25A39P2-201ENST00000537614 270 ntBASIC20.18■□□□□ 0.82
PDS5AQ29RF7 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC20.18■□□□□ 0.82
PDS5AQ29RF7 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDS5AQ29RF7 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC20.18■□□□□ 0.82
PDS5AQ29RF7 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC20.18■□□□□ 0.82
PDS5AQ29RF7 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.18■□□□□ 0.82
PDS5AQ29RF7 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDS5AQ29RF7 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC20.18■□□□□ 0.82
PDS5AQ29RF7 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDS5AQ29RF7 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
PDS5AQ29RF7 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC20.18■□□□□ 0.82
PDS5AQ29RF7 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDS5AQ29RF7 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC20.18■□□□□ 0.82
PDS5AQ29RF7 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.18■□□□□ 0.82
PDS5AQ29RF7 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
PDS5AQ29RF7 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
PDS5AQ29RF7 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC20.17■□□□□ 0.82
PDS5AQ29RF7 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC20.17■□□□□ 0.82
PDS5AQ29RF7 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC20.17■□□□□ 0.82
PDS5AQ29RF7 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC20.17■□□□□ 0.82
PDS5AQ29RF7 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PDS5AQ29RF7 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PDS5AQ29RF7 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC20.17■□□□□ 0.82
PDS5AQ29RF7 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PDS5AQ29RF7 RBPMS2P1-201ENST00000437762 623 ntBASIC20.17■□□□□ 0.82
PDS5AQ29RF7 VPS29-207ENST00000549970 818 ntTSL 3 BASIC20.17■□□□□ 0.82
PDS5AQ29RF7 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC20.17■□□□□ 0.82
PDS5AQ29RF7 AC026150.2-201ENST00000564693 1156 ntBASIC20.17■□□□□ 0.82
PDS5AQ29RF7 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
PDS5AQ29RF7 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC20.17■□□□□ 0.82
PDS5AQ29RF7 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC20.17■□□□□ 0.82
PDS5AQ29RF7 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PDS5AQ29RF7 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
PDS5AQ29RF7 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
PDS5AQ29RF7 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PDS5AQ29RF7 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC20.16■□□□□ 0.82
PDS5AQ29RF7 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDS5AQ29RF7 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC20.16■□□□□ 0.82
PDS5AQ29RF7 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC20.16■□□□□ 0.82
PDS5AQ29RF7 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
PDS5AQ29RF7 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDS5AQ29RF7 PCDHB17P-201ENST00000539533 2393 ntBASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms