Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
NKX6-1P78426 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
NKX6-1P78426 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.01□□□□□ -0.01
NKX6-1P78426 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NKX6-1P78426 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.01□□□□□ -0.01
NKX6-1P78426 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
NKX6-1P78426 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NKX6-1P78426 AC002310.6-201ENST00000624451 1377 ntBASIC15.01□□□□□ -0.01
NKX6-1P78426 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
NKX6-1P78426 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NKX6-1P78426 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
NKX6-1P78426 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NKX6-1P78426 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NKX6-1P78426 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.01□□□□□ -0.01
NKX6-1P78426 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NKX6-1P78426 AL645939.2-201ENST00000427340 991 ntBASIC15.01□□□□□ -0.01
NKX6-1P78426 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.01□□□□□ -0.01
NKX6-1P78426 AC136632.2-201ENST00000512891 861 ntBASIC15.01□□□□□ -0.01
NKX6-1P78426 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
NKX6-1P78426 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.01□□□□□ -0.01
NKX6-1P78426 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.01□□□□□ -0.01
NKX6-1P78426 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.01□□□□□ -0.01
NKX6-1P78426 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
NKX6-1P78426 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.01□□□□□ -0.01
NKX6-1P78426 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.01□□□□□ -0.01
NKX6-1P78426 AL139327.4-201ENST00000612362 153 ntBASIC15.01□□□□□ -0.01
NKX6-1P78426 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.01□□□□□ -0.01
NKX6-1P78426 AL589182.2-201ENST00000619332 1049 ntBASIC15.01□□□□□ -0.01
NKX6-1P78426 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.01□□□□□ -0.01
NKX6-1P78426 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NKX6-1P78426 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
NKX6-1P78426 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
NKX6-1P78426 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
NKX6-1P78426 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
NKX6-1P78426 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
NKX6-1P78426 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NKX6-1P78426 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NKX6-1P78426 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NKX6-1P78426 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
NKX6-1P78426 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NKX6-1P78426 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NKX6-1P78426 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC15□□□□□ -0.01
NKX6-1P78426 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15□□□□□ -0.01
NKX6-1P78426 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15□□□□□ -0.01
NKX6-1P78426 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC15□□□□□ -0.01
NKX6-1P78426 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15□□□□□ -0.01
NKX6-1P78426 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NKX6-1P78426 AC133963.1-201ENST00000504166 1679 ntBASIC15□□□□□ -0.01
NKX6-1P78426 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
NKX6-1P78426 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15□□□□□ -0.01
NKX6-1P78426 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NKX6-1P78426 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
NKX6-1P78426 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15□□□□□ -0.01
NKX6-1P78426 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC15□□□□□ -0.01
NKX6-1P78426 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15□□□□□ -0.01
NKX6-1P78426 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
NKX6-1P78426 AL355312.1-201ENST00000407115 2176 ntBASIC15□□□□□ -0.01
NKX6-1P78426 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15□□□□□ -0.01
NKX6-1P78426 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC15□□□□□ -0.01
NKX6-1P78426 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NKX6-1P78426 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15□□□□□ -0.01
NKX6-1P78426 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NKX6-1P78426 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
NKX6-1P78426 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
NKX6-1P78426 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NKX6-1P78426 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NKX6-1P78426 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NKX6-1P78426 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15□□□□□ -0.01
NKX6-1P78426 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15□□□□□ -0.01
NKX6-1P78426 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15□□□□□ -0.01
NKX6-1P78426 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15□□□□□ -0.01
NKX6-1P78426 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
NKX6-1P78426 KRT18P2-201ENST00000447938 1258 ntBASIC15□□□□□ -0.01
NKX6-1P78426 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15□□□□□ -0.01
NKX6-1P78426 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15□□□□□ -0.01
NKX6-1P78426 YBX1P5-201ENST00000509441 847 ntBASIC15□□□□□ -0.01
NKX6-1P78426 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15□□□□□ -0.01
NKX6-1P78426 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15□□□□□ -0.01
NKX6-1P78426 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
NKX6-1P78426 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15□□□□□ -0.01
NKX6-1P78426 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
NKX6-1P78426 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
NKX6-1P78426 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15□□□□□ -0.01
NKX6-1P78426 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15□□□□□ -0.01
NKX6-1P78426 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NKX6-1P78426 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
NKX6-1P78426 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15□□□□□ -0.01
NKX6-1P78426 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
NKX6-1P78426 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15□□□□□ -0.01
NKX6-1P78426 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NKX6-1P78426 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15□□□□□ -0.01
NKX6-1P78426 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15□□□□□ -0.01
NKX6-1P78426 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15□□□□□ -0.01
NKX6-1P78426 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
NKX6-1P78426 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NKX6-1P78426 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NKX6-1P78426 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15□□□□□ -0.01
NKX6-1P78426 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15□□□□□ -0.01
NKX6-1P78426 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
NKX6-1P78426 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms