Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
ERVFC1-1P60608 AC130371.2-201ENST00000619443 611 ntBASIC13.26□□□□□ -0.29
ERVFC1-1P60608 ABBA01031674.1-201ENST00000635145 728 ntBASIC13.26□□□□□ -0.29
ERVFC1-1P60608 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC13.26□□□□□ -0.29
ERVFC1-1P60608 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
ERVFC1-1P60608 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
ERVFC1-1P60608 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
ERVFC1-1P60608 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ERVFC1-1P60608 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
ERVFC1-1P60608 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
ERVFC1-1P60608 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ERVFC1-1P60608 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC13.25□□□□□ -0.29
ERVFC1-1P60608 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.25□□□□□ -0.29
ERVFC1-1P60608 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ERVFC1-1P60608 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ERVFC1-1P60608 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC13.25□□□□□ -0.29
ERVFC1-1P60608 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
ERVFC1-1P60608 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
ERVFC1-1P60608 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC13.25□□□□□ -0.29
ERVFC1-1P60608 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ERVFC1-1P60608 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
ERVFC1-1P60608 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
ERVFC1-1P60608 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC13.25□□□□□ -0.29
ERVFC1-1P60608 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.25□□□□□ -0.29
ERVFC1-1P60608 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC13.25□□□□□ -0.29
ERVFC1-1P60608 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
ERVFC1-1P60608 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
ERVFC1-1P60608 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
ERVFC1-1P60608 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC13.25□□□□□ -0.29
ERVFC1-1P60608 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ERVFC1-1P60608 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ERVFC1-1P60608 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ERVFC1-1P60608 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC13.25□□□□□ -0.29
ERVFC1-1P60608 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC13.25□□□□□ -0.29
ERVFC1-1P60608 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
ERVFC1-1P60608 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ERVFC1-1P60608 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC13.25□□□□□ -0.29
ERVFC1-1P60608 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
ERVFC1-1P60608 AC026271.3-201ENST00000571884 352 ntBASIC13.25□□□□□ -0.29
ERVFC1-1P60608 AC008687.5-201ENST00000593746 558 ntBASIC13.25□□□□□ -0.29
ERVFC1-1P60608 AL031985.4-201ENST00000642138 673 ntBASIC13.25□□□□□ -0.29
ERVFC1-1P60608 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ERVFC1-1P60608 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
ERVFC1-1P60608 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ERVFC1-1P60608 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ERVFC1-1P60608 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC13.25□□□□□ -0.29
ERVFC1-1P60608 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ERVFC1-1P60608 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
ERVFC1-1P60608 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.25□□□□□ -0.29
ERVFC1-1P60608 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ERVFC1-1P60608 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC13.25□□□□□ -0.29
ERVFC1-1P60608 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.25□□□□□ -0.29
ERVFC1-1P60608 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC13.25□□□□□ -0.29
ERVFC1-1P60608 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
ERVFC1-1P60608 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
ERVFC1-1P60608 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ERVFC1-1P60608 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ERVFC1-1P60608 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ERVFC1-1P60608 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ERVFC1-1P60608 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
ERVFC1-1P60608 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
ERVFC1-1P60608 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
ERVFC1-1P60608 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
ERVFC1-1P60608 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ERVFC1-1P60608 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ERVFC1-1P60608 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC13.24□□□□□ -0.29
ERVFC1-1P60608 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ERVFC1-1P60608 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
ERVFC1-1P60608 MED29-202ENST00000594368 1471 ntTSL 2 BASIC13.24□□□□□ -0.29
ERVFC1-1P60608 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
ERVFC1-1P60608 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ERVFC1-1P60608 KRT16P1-201ENST00000399124 1418 ntBASIC13.24□□□□□ -0.29
ERVFC1-1P60608 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ERVFC1-1P60608 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC13.24□□□□□ -0.29
ERVFC1-1P60608 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC13.24□□□□□ -0.29
ERVFC1-1P60608 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ERVFC1-1P60608 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.24□□□□□ -0.29
ERVFC1-1P60608 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
ERVFC1-1P60608 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
ERVFC1-1P60608 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
ERVFC1-1P60608 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
ERVFC1-1P60608 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ERVFC1-1P60608 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
ERVFC1-1P60608 AL353807.1-201ENST00000427475 662 ntBASIC13.24□□□□□ -0.29
ERVFC1-1P60608 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
ERVFC1-1P60608 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC13.24□□□□□ -0.29
ERVFC1-1P60608 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
ERVFC1-1P60608 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC13.24□□□□□ -0.29
ERVFC1-1P60608 AL049637.2-201ENST00000641778 930 ntBASIC13.24□□□□□ -0.29
ERVFC1-1P60608 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ERVFC1-1P60608 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ERVFC1-1P60608 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC13.24□□□□□ -0.29
ERVFC1-1P60608 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.24□□□□□ -0.29
ERVFC1-1P60608 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ERVFC1-1P60608 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
ERVFC1-1P60608 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC13.24□□□□□ -0.29
ERVFC1-1P60608 OR2I1P-210ENST00000642037 4691 ntBASIC13.24□□□□□ -0.29
ERVFC1-1P60608 AC093525.9-201ENST00000624961 1746 ntBASIC13.24□□□□□ -0.29
ERVFC1-1P60608 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ERVFC1-1P60608 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms