Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH8P55286 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH8P55286 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH8P55286 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CDH8P55286 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH8P55286 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CDH8P55286 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.08■□□□□ 0.48
CDH8P55286 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC18.08■□□□□ 0.48
CDH8P55286 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.08■□□□□ 0.48
CDH8P55286 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CDH8P55286 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.08■□□□□ 0.48
CDH8P55286 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH8P55286 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CDH8P55286 AC025580.3-201ENST00000617932 1424 ntBASIC18.07■□□□□ 0.48
CDH8P55286 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDH8P55286 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CDH8P55286 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
CDH8P55286 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.07■□□□□ 0.48
CDH8P55286 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDH8P55286 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDH8P55286 AC106886.4-201ENST00000623557 2502 ntBASIC18.07■□□□□ 0.48
CDH8P55286 AL645728.1-201ENST00000366221 2101 ntBASIC18.07■□□□□ 0.48
CDH8P55286 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.07■□□□□ 0.48
CDH8P55286 PMS2P7-201ENST00000506558 1336 ntBASIC18.07■□□□□ 0.48
CDH8P55286 BCAR1-209ENST00000546196 1340 ntBASIC18.07■□□□□ 0.48
CDH8P55286 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.07■□□□□ 0.48
CDH8P55286 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH8P55286 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CDH8P55286 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH8P55286 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH8P55286 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDH8P55286 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CDH8P55286 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CDH8P55286 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.07■□□□□ 0.48
CDH8P55286 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC18.07■□□□□ 0.48
CDH8P55286 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.07■□□□□ 0.48
CDH8P55286 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH8P55286 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDH8P55286 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDH8P55286 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.07■□□□□ 0.48
CDH8P55286 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH8P55286 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.07■□□□□ 0.48
CDH8P55286 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CDH8P55286 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH8P55286 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH8P55286 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH8P55286 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.06■□□□□ 0.48
CDH8P55286 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDH8P55286 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
CDH8P55286 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH8P55286 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDH8P55286 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.06■□□□□ 0.48
CDH8P55286 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH8P55286 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH8P55286 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH8P55286 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
CDH8P55286 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDH8P55286 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH8P55286 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.06■□□□□ 0.48
CDH8P55286 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
CDH8P55286 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.06■□□□□ 0.48
CDH8P55286 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH8P55286 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH8P55286 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.06■□□□□ 0.48
CDH8P55286 MPDU1-223ENST00000582151 728 ntBASIC18.06■□□□□ 0.48
CDH8P55286 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH8P55286 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.06■□□□□ 0.48
CDH8P55286 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.06■□□□□ 0.48
CDH8P55286 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH8P55286 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDH8P55286 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CDH8P55286 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.06■□□□□ 0.48
CDH8P55286 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH8P55286 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDH8P55286 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH8P55286 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH8P55286 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH8P55286 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.06■□□□□ 0.48
CDH8P55286 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH8P55286 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC18.06■□□□□ 0.48
CDH8P55286 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDH8P55286 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDH8P55286 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CDH8P55286 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDH8P55286 TUBB8P12-201ENST00000308911 1335 ntBASIC18.05■□□□□ 0.48
CDH8P55286 TUBB7P-202ENST00000428444 1305 ntBASIC18.05■□□□□ 0.48
CDH8P55286 TUBB8P7-204ENST00000567960 1332 ntBASIC18.05■□□□□ 0.48
CDH8P55286 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDH8P55286 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.05■□□□□ 0.48
CDH8P55286 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDH8P55286 HARS-203ENST00000431330 1774 ntTSL 2 BASIC18.05■□□□□ 0.48
CDH8P55286 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDH8P55286 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
CDH8P55286 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDH8P55286 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDH8P55286 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18.05■□□□□ 0.48
CDH8P55286 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.05■□□□□ 0.48
CDH8P55286 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC18.05■□□□□ 0.48
CDH8P55286 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.05■□□□□ 0.48
CDH8P55286 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms