Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
NCKAP1LP55160 AC012569.1-201ENST00000591191 1524 ntBASIC18.53■□□□□ 0.56
NCKAP1LP55160 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NCKAP1LP55160 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
NCKAP1LP55160 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NCKAP1LP55160 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NCKAP1LP55160 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NCKAP1LP55160 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NCKAP1LP55160 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
NCKAP1LP55160 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NCKAP1LP55160 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
NCKAP1LP55160 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NCKAP1LP55160 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.52■□□□□ 0.56
NCKAP1LP55160 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NCKAP1LP55160 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NCKAP1LP55160 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC18.52■□□□□ 0.56
NCKAP1LP55160 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NCKAP1LP55160 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.52■□□□□ 0.56
NCKAP1LP55160 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
NCKAP1LP55160 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NCKAP1LP55160 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NCKAP1LP55160 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
NCKAP1LP55160 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC18.52■□□□□ 0.56
NCKAP1LP55160 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
NCKAP1LP55160 PDPK2P-202ENST00000562415 1191 ntBASIC18.52■□□□□ 0.56
NCKAP1LP55160 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.52■□□□□ 0.56
NCKAP1LP55160 AL031432.2-201ENST00000566714 459 ntBASIC18.52■□□□□ 0.56
NCKAP1LP55160 COX5A-206ENST00000568783 571 ntTSL 3 BASIC18.52■□□□□ 0.56
NCKAP1LP55160 AL928711.1-201ENST00000570165 459 ntBASIC18.52■□□□□ 0.56
NCKAP1LP55160 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC18.52■□□□□ 0.56
NCKAP1LP55160 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NCKAP1LP55160 SNX33P1-201ENST00000592116 1762 ntBASIC18.52■□□□□ 0.55
NCKAP1LP55160 RNF216P1-203ENST00000404404 2427 ntBASIC18.52■□□□□ 0.55
NCKAP1LP55160 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
NCKAP1LP55160 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
NCKAP1LP55160 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
NCKAP1LP55160 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
NCKAP1LP55160 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.52■□□□□ 0.55
NCKAP1LP55160 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
NCKAP1LP55160 AD000864.1-201ENST00000624076 2295 ntBASIC18.52■□□□□ 0.55
NCKAP1LP55160 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
NCKAP1LP55160 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
NCKAP1LP55160 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
NCKAP1LP55160 HTR7P1-202ENST00000624664 4411 ntBASIC18.52■□□□□ 0.55
NCKAP1LP55160 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.52■□□□□ 0.55
NCKAP1LP55160 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NCKAP1LP55160 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NCKAP1LP55160 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NCKAP1LP55160 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
NCKAP1LP55160 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
NCKAP1LP55160 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NCKAP1LP55160 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NCKAP1LP55160 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NCKAP1LP55160 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NCKAP1LP55160 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
NCKAP1LP55160 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NCKAP1LP55160 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NCKAP1LP55160 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NCKAP1LP55160 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NCKAP1LP55160 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NCKAP1LP55160 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NCKAP1LP55160 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NCKAP1LP55160 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NCKAP1LP55160 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NCKAP1LP55160 HMGA1P7-201ENST00000406908 502 ntBASIC18.51■□□□□ 0.55
NCKAP1LP55160 FALEC-201ENST00000416894 566 ntTSL 3 BASIC18.51■□□□□ 0.55
NCKAP1LP55160 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.51■□□□□ 0.55
NCKAP1LP55160 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.51■□□□□ 0.55
NCKAP1LP55160 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC18.51■□□□□ 0.55
NCKAP1LP55160 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.51■□□□□ 0.55
NCKAP1LP55160 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
NCKAP1LP55160 WT1-AS_2.1-201ENST00000613208 137 ntBASIC18.51■□□□□ 0.55
NCKAP1LP55160 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC18.51■□□□□ 0.55
NCKAP1LP55160 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NCKAP1LP55160 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NCKAP1LP55160 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NCKAP1LP55160 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
NCKAP1LP55160 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
NCKAP1LP55160 AC106886.4-201ENST00000623557 2502 ntBASIC18.51■□□□□ 0.55
NCKAP1LP55160 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NCKAP1LP55160 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NCKAP1LP55160 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
NCKAP1LP55160 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
NCKAP1LP55160 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
NCKAP1LP55160 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
NCKAP1LP55160 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NCKAP1LP55160 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NCKAP1LP55160 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
NCKAP1LP55160 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NCKAP1LP55160 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
NCKAP1LP55160 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
NCKAP1LP55160 AC023274.1-201ENST00000418278 595 ntBASIC18.5■□□□□ 0.55
NCKAP1LP55160 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18.5■□□□□ 0.55
NCKAP1LP55160 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
NCKAP1LP55160 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NCKAP1LP55160 MED16-214ENST00000617672 554 ntTSL 5 BASIC18.5■□□□□ 0.55
NCKAP1LP55160 AP001350.2-201ENST00000625104 1094 ntBASIC18.5■□□□□ 0.55
NCKAP1LP55160 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC18.5■□□□□ 0.55
NCKAP1LP55160 AL139011.1-202ENST00000642063 584 ntBASIC18.5■□□□□ 0.55
NCKAP1LP55160 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms