Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NEK3P51956 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NEK3P51956 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
NEK3P51956 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.54■□□□□ 0.4
NEK3P51956 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NEK3P51956 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
NEK3P51956 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NEK3P51956 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
NEK3P51956 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.54■□□□□ 0.4
NEK3P51956 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NEK3P51956 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NEK3P51956 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NEK3P51956 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NEK3P51956 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NEK3P51956 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NEK3P51956 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.54■□□□□ 0.4
NEK3P51956 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NEK3P51956 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
NEK3P51956 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NEK3P51956 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.54■□□□□ 0.4
NEK3P51956 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NEK3P51956 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
NEK3P51956 SLC25A1P3-201ENST00000395415 828 ntBASIC17.54■□□□□ 0.4
NEK3P51956 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.54■□□□□ 0.4
NEK3P51956 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.54■□□□□ 0.4
NEK3P51956 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.54■□□□□ 0.4
NEK3P51956 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.54■□□□□ 0.4
NEK3P51956 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
NEK3P51956 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.54■□□□□ 0.4
NEK3P51956 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.54■□□□□ 0.4
NEK3P51956 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
NEK3P51956 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
NEK3P51956 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NEK3P51956 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NEK3P51956 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NEK3P51956 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
NEK3P51956 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
NEK3P51956 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
NEK3P51956 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NEK3P51956 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
NEK3P51956 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NEK3P51956 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
NEK3P51956 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
NEK3P51956 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NEK3P51956 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NEK3P51956 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NEK3P51956 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.53■□□□□ 0.4
NEK3P51956 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
NEK3P51956 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.53■□□□□ 0.4
NEK3P51956 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NEK3P51956 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NEK3P51956 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NEK3P51956 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NEK3P51956 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.53■□□□□ 0.4
NEK3P51956 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NEK3P51956 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NEK3P51956 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.53■□□□□ 0.4
NEK3P51956 MIR574-201ENST00000385209 96 ntBASIC17.53■□□□□ 0.4
NEK3P51956 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NEK3P51956 KRT18P27-201ENST00000427733 1299 ntBASIC17.53■□□□□ 0.4
NEK3P51956 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.53■□□□□ 0.4
NEK3P51956 KRT18P58-201ENST00000527480 1120 ntBASIC17.53■□□□□ 0.4
NEK3P51956 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.53■□□□□ 0.4
NEK3P51956 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.53■□□□□ 0.4
NEK3P51956 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.53■□□□□ 0.4
NEK3P51956 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.53■□□□□ 0.4
NEK3P51956 AC145285.3-201ENST00000564603 959 ntBASIC17.53■□□□□ 0.4
NEK3P51956 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.53■□□□□ 0.4
NEK3P51956 AL356488.2-201ENST00000602755 427 ntBASIC17.53■□□□□ 0.4
NEK3P51956 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
NEK3P51956 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NEK3P51956 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
NEK3P51956 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NEK3P51956 AC104109.2-201ENST00000602919 1418 ntBASIC17.53■□□□□ 0.4
NEK3P51956 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NEK3P51956 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
NEK3P51956 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.53■□□□□ 0.4
NEK3P51956 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.53■□□□□ 0.4
NEK3P51956 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.52■□□□□ 0.4
NEK3P51956 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NEK3P51956 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NEK3P51956 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
NEK3P51956 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NEK3P51956 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.52■□□□□ 0.4
NEK3P51956 AL596257.1-201ENST00000641463 2694 ntBASIC17.52■□□□□ 0.4
NEK3P51956 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
NEK3P51956 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NEK3P51956 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NEK3P51956 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NEK3P51956 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.52■□□□□ 0.4
NEK3P51956 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.52■□□□□ 0.4
NEK3P51956 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.52■□□□□ 0.4
NEK3P51956 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.52■□□□□ 0.4
NEK3P51956 AL671883.3-201ENST00000603274 991 ntBASIC17.52■□□□□ 0.4
NEK3P51956 AC117500.6-201ENST00000624871 588 ntBASIC17.52■□□□□ 0.4
NEK3P51956 PGM5P2-202ENST00000637225 1043 ntBASIC17.52■□□□□ 0.4
NEK3P51956 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NEK3P51956 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.52■□□□□ 0.4
NEK3P51956 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
NEK3P51956 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms