Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CSNK1DP48730 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CSNK1DP48730 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.95■□□□□ 0.3
CSNK1DP48730 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CSNK1DP48730 SNX33P1-201ENST00000592116 1762 ntBASIC16.94■□□□□ 0.3
CSNK1DP48730 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CSNK1DP48730 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.94■□□□□ 0.3
CSNK1DP48730 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CSNK1DP48730 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CSNK1DP48730 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CSNK1DP48730 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CSNK1DP48730 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CSNK1DP48730 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CSNK1DP48730 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CSNK1DP48730 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.94■□□□□ 0.3
CSNK1DP48730 AC092474.2-201ENST00000424288 719 ntBASIC16.94■□□□□ 0.3
CSNK1DP48730 GPX1P2-201ENST00000429271 606 ntBASIC16.94■□□□□ 0.3
CSNK1DP48730 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.94■□□□□ 0.3
CSNK1DP48730 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CSNK1DP48730 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CSNK1DP48730 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.94■□□□□ 0.3
CSNK1DP48730 AC092865.5-201ENST00000545435 363 ntBASIC16.94■□□□□ 0.3
CSNK1DP48730 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CSNK1DP48730 AL031055.1-201ENST00000606362 631 ntBASIC16.94■□□□□ 0.3
CSNK1DP48730 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CSNK1DP48730 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CSNK1DP48730 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CSNK1DP48730 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CSNK1DP48730 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
CSNK1DP48730 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CSNK1DP48730 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CSNK1DP48730 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.94■□□□□ 0.3
CSNK1DP48730 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CSNK1DP48730 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CSNK1DP48730 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CSNK1DP48730 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CSNK1DP48730 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CSNK1DP48730 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.94■□□□□ 0.3
CSNK1DP48730 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.94■□□□□ 0.3
CSNK1DP48730 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.93■□□□□ 0.3
CSNK1DP48730 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CSNK1DP48730 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CSNK1DP48730 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
CSNK1DP48730 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.93■□□□□ 0.3
CSNK1DP48730 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CSNK1DP48730 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CSNK1DP48730 AC092919.2-201ENST00000623631 1645 ntBASIC16.93■□□□□ 0.3
CSNK1DP48730 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CSNK1DP48730 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CSNK1DP48730 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CSNK1DP48730 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CSNK1DP48730 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CSNK1DP48730 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.93■□□□□ 0.3
CSNK1DP48730 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CSNK1DP48730 KRT18P13-201ENST00000400056 1290 ntBASIC16.93■□□□□ 0.3
CSNK1DP48730 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.93■□□□□ 0.3
CSNK1DP48730 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.93■□□□□ 0.3
CSNK1DP48730 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CSNK1DP48730 AC112482.1-201ENST00000492080 688 ntBASIC16.93■□□□□ 0.3
CSNK1DP48730 YBX1P5-201ENST00000509441 847 ntBASIC16.93■□□□□ 0.3
CSNK1DP48730 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
CSNK1DP48730 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.93■□□□□ 0.3
CSNK1DP48730 AC005829.1-201ENST00000570002 483 ntBASIC16.93■□□□□ 0.3
CSNK1DP48730 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.93■□□□□ 0.3
CSNK1DP48730 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.93■□□□□ 0.3
CSNK1DP48730 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.93■□□□□ 0.3
CSNK1DP48730 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CSNK1DP48730 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CSNK1DP48730 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CSNK1DP48730 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CSNK1DP48730 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.93■□□□□ 0.3
CSNK1DP48730 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CSNK1DP48730 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
CSNK1DP48730 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CSNK1DP48730 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.93■□□□□ 0.3
CSNK1DP48730 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CSNK1DP48730 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CSNK1DP48730 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CSNK1DP48730 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CSNK1DP48730 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.93■□□□□ 0.3
CSNK1DP48730 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CSNK1DP48730 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CSNK1DP48730 AC005915.1-201ENST00000624912 2018 ntBASIC16.92■□□□□ 0.3
CSNK1DP48730 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.92■□□□□ 0.3
CSNK1DP48730 AC106820.2-201ENST00000563775 3264 ntBASIC16.92■□□□□ 0.3
CSNK1DP48730 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
CSNK1DP48730 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.92■□□□□ 0.3
CSNK1DP48730 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CSNK1DP48730 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.92■□□□□ 0.3
CSNK1DP48730 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CSNK1DP48730 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CSNK1DP48730 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CSNK1DP48730 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.92■□□□□ 0.3
CSNK1DP48730 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CSNK1DP48730 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CSNK1DP48730 HTR5BP-201ENST00000430851 1154 ntBASIC16.92■□□□□ 0.3
CSNK1DP48730 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.92■□□□□ 0.3
CSNK1DP48730 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CSNK1DP48730 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.92■□□□□ 0.3
CSNK1DP48730 HLA-J-202ENST00000469281 1241 ntBASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms