Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC19.08■□□□□ 0.64
TM4SF4P48230 AL589987.1-201ENST00000453380 819 ntBASIC19.08■□□□□ 0.64
TM4SF4P48230 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC19.08■□□□□ 0.64
TM4SF4P48230 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TM4SF4P48230 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC19.08■□□□□ 0.64
TM4SF4P48230 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC19.08■□□□□ 0.64
TM4SF4P48230 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TM4SF4P48230 TECR-220ENST00000600083 1204 ntTSL 2 BASIC19.08■□□□□ 0.64
TM4SF4P48230 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TM4SF4P48230 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
TM4SF4P48230 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TM4SF4P48230 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.08■□□□□ 0.64
TM4SF4P48230 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TM4SF4P48230 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TM4SF4P48230 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.08■□□□□ 0.64
TM4SF4P48230 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
TM4SF4P48230 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC19.08■□□□□ 0.64
TM4SF4P48230 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TM4SF4P48230 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.07■□□□□ 0.64
TM4SF4P48230 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
TM4SF4P48230 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TM4SF4P48230 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TM4SF4P48230 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
TM4SF4P48230 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TM4SF4P48230 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TM4SF4P48230 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TM4SF4P48230 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TM4SF4P48230 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC19.07■□□□□ 0.64
TM4SF4P48230 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC19.07■□□□□ 0.64
TM4SF4P48230 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TM4SF4P48230 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC19.07■□□□□ 0.64
TM4SF4P48230 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC19.07■□□□□ 0.64
TM4SF4P48230 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC19.07■□□□□ 0.64
TM4SF4P48230 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC19.07■□□□□ 0.64
TM4SF4P48230 IGHV3OR16-16-201ENST00000563644 343 ntBASIC19.07■□□□□ 0.64
TM4SF4P48230 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC19.07■□□□□ 0.64
TM4SF4P48230 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC19.07■□□□□ 0.64
TM4SF4P48230 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC19.07■□□□□ 0.64
TM4SF4P48230 AC103810.3-201ENST00000583567 96 ntBASIC19.07■□□□□ 0.64
TM4SF4P48230 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
TM4SF4P48230 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC19.07■□□□□ 0.64
TM4SF4P48230 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC19.07■□□□□ 0.64
TM4SF4P48230 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TM4SF4P48230 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
TM4SF4P48230 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TM4SF4P48230 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TM4SF4P48230 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TM4SF4P48230 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC19.07■□□□□ 0.64
TM4SF4P48230 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TM4SF4P48230 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TM4SF4P48230 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TM4SF4P48230 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TM4SF4P48230 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TM4SF4P48230 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.06■□□□□ 0.64
TM4SF4P48230 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
TM4SF4P48230 TUBB1P2-201ENST00000422712 1306 ntBASIC19.06■□□□□ 0.64
TM4SF4P48230 TUBB1P1-201ENST00000503144 1300 ntBASIC19.06■□□□□ 0.64
TM4SF4P48230 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TM4SF4P48230 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC19.06■□□□□ 0.64
TM4SF4P48230 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TM4SF4P48230 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
TM4SF4P48230 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
TM4SF4P48230 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC19.06■□□□□ 0.64
TM4SF4P48230 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC19.06■□□□□ 0.64
TM4SF4P48230 KRT43P-201ENST00000434019 910 ntBASIC19.06■□□□□ 0.64
TM4SF4P48230 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC19.06■□□□□ 0.64
TM4SF4P48230 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
TM4SF4P48230 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
TM4SF4P48230 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC19.06■□□□□ 0.64
TM4SF4P48230 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC19.06■□□□□ 0.64
TM4SF4P48230 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC19.06■□□□□ 0.64
TM4SF4P48230 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC19.06■□□□□ 0.64
TM4SF4P48230 NAA38-207ENST00000576861 556 ntTSL 3 BASIC19.06■□□□□ 0.64
TM4SF4P48230 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC19.06■□□□□ 0.64
TM4SF4P48230 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC19.06■□□□□ 0.64
TM4SF4P48230 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC19.06■□□□□ 0.64
TM4SF4P48230 MIR8072-201ENST00000614241 80 ntBASIC19.06■□□□□ 0.64
TM4SF4P48230 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TM4SF4P48230 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TM4SF4P48230 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TM4SF4P48230 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TM4SF4P48230 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
TM4SF4P48230 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TM4SF4P48230 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC19.06■□□□□ 0.64
TM4SF4P48230 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC19.06■□□□□ 0.64
TM4SF4P48230 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.06■□□□□ 0.64
TM4SF4P48230 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TM4SF4P48230 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
TM4SF4P48230 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
TM4SF4P48230 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TM4SF4P48230 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
TM4SF4P48230 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
TM4SF4P48230 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.05■□□□□ 0.64
TM4SF4P48230 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TM4SF4P48230 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TM4SF4P48230 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.05■□□□□ 0.64
TM4SF4P48230 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
TM4SF4P48230 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.05■□□□□ 0.64
TM4SF4P48230 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.05■□□□□ 0.64
TM4SF4P48230 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms