Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SNCAP37840 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SNCAP37840 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SNCAP37840 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.03□□□□□ -0.16
SNCAP37840 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SNCAP37840 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.03□□□□□ -0.16
SNCAP37840 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SNCAP37840 AL365203.3-201ENST00000609742 2057 ntBASIC14.03□□□□□ -0.16
SNCAP37840 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SNCAP37840 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SNCAP37840 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SNCAP37840 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
SNCAP37840 LINC02228-204ENST00000642115 2962 ntBASIC14.03□□□□□ -0.16
SNCAP37840 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SNCAP37840 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SNCAP37840 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
SNCAP37840 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SNCAP37840 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SNCAP37840 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SNCAP37840 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC14.03□□□□□ -0.16
SNCAP37840 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SNCAP37840 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC14.03□□□□□ -0.16
SNCAP37840 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC14.03□□□□□ -0.16
SNCAP37840 SLC25A3P1-201ENST00000443844 931 ntBASIC14.03□□□□□ -0.16
SNCAP37840 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC14.03□□□□□ -0.16
SNCAP37840 AP003733.1-201ENST00000491725 852 ntBASIC14.03□□□□□ -0.16
SNCAP37840 DET1-205ENST00000558413 583 ntTSL 4 BASIC14.03□□□□□ -0.16
SNCAP37840 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC14.03□□□□□ -0.16
SNCAP37840 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
SNCAP37840 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SNCAP37840 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC14.03□□□□□ -0.16
SNCAP37840 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC14.03□□□□□ -0.16
SNCAP37840 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SNCAP37840 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SNCAP37840 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC14.03□□□□□ -0.16
SNCAP37840 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SNCAP37840 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SNCAP37840 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC14.03□□□□□ -0.16
SNCAP37840 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SNCAP37840 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SNCAP37840 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
SNCAP37840 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SNCAP37840 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.03□□□□□ -0.16
SNCAP37840 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SNCAP37840 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SNCAP37840 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SNCAP37840 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SNCAP37840 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SNCAP37840 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.03□□□□□ -0.16
SNCAP37840 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SNCAP37840 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SNCAP37840 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SNCAP37840 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
SNCAP37840 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
SNCAP37840 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
SNCAP37840 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
SNCAP37840 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.16
SNCAP37840 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SNCAP37840 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SNCAP37840 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SNCAP37840 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
SNCAP37840 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
SNCAP37840 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SNCAP37840 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SNCAP37840 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SNCAP37840 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SNCAP37840 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SNCAP37840 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
SNCAP37840 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
SNCAP37840 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.16
SNCAP37840 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC14.02□□□□□ -0.16
SNCAP37840 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
SNCAP37840 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SNCAP37840 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.17
SNCAP37840 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SNCAP37840 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SNCAP37840 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SNCAP37840 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SNCAP37840 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SNCAP37840 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SNCAP37840 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SNCAP37840 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC14.02□□□□□ -0.17
SNCAP37840 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SNCAP37840 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
SNCAP37840 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC14.02□□□□□ -0.17
SNCAP37840 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.17
SNCAP37840 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SNCAP37840 DBET-201ENST00000630918 3363 ntBASIC14.02□□□□□ -0.17
SNCAP37840 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SNCAP37840 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SNCAP37840 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
SNCAP37840 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SNCAP37840 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
SNCAP37840 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SNCAP37840 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SNCAP37840 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SNCAP37840 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SNCAP37840 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SNCAP37840 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
SNCAP37840 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms