Protein–RNA interactions for Protein: P36954

POLR2I, DNA-directed RNA polymerase II subunit RPB9, humanhuman

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2IP36954 TNRC18P2-201ENST00000417666 2714 ntBASIC15.66■□□□□ 0.1
POLR2IP36954 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
POLR2IP36954 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
POLR2IP36954 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
POLR2IP36954 CRAT-202ENST00000393384 973 ntTSL 2 BASIC15.66■□□□□ 0.1
POLR2IP36954 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
POLR2IP36954 CD70-202ENST00000423145 881 ntTSL 2 BASIC15.66■□□□□ 0.1
POLR2IP36954 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC15.66■□□□□ 0.1
POLR2IP36954 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC15.66■□□□□ 0.1
POLR2IP36954 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
POLR2IP36954 AC092597.1-201ENST00000487352 616 ntBASIC15.66■□□□□ 0.1
POLR2IP36954 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
POLR2IP36954 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
POLR2IP36954 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC15.66■□□□□ 0.1
POLR2IP36954 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC15.66■□□□□ 0.1
POLR2IP36954 NAA38-203ENST00000575071 553 ntTSL 2 BASIC15.66■□□□□ 0.1
POLR2IP36954 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.66■□□□□ 0.1
POLR2IP36954 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC15.66■□□□□ 0.1
POLR2IP36954 AL138966.2-201ENST00000621997 464 ntBASIC15.66■□□□□ 0.1
POLR2IP36954 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
POLR2IP36954 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
POLR2IP36954 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
POLR2IP36954 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
POLR2IP36954 KRT8P10-201ENST00000450021 1447 ntBASIC15.66■□□□□ 0.1
POLR2IP36954 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
POLR2IP36954 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
POLR2IP36954 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
POLR2IP36954 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.66■□□□□ 0.1
POLR2IP36954 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
POLR2IP36954 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
POLR2IP36954 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
POLR2IP36954 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
POLR2IP36954 AP002414.2-201ENST00000591780 3365 ntBASIC15.66■□□□□ 0.1
POLR2IP36954 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.65■□□□□ 0.1
POLR2IP36954 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
POLR2IP36954 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
POLR2IP36954 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
POLR2IP36954 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
POLR2IP36954 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
POLR2IP36954 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
POLR2IP36954 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
POLR2IP36954 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
POLR2IP36954 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
POLR2IP36954 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
POLR2IP36954 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
POLR2IP36954 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.65■□□□□ 0.1
POLR2IP36954 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
POLR2IP36954 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.65■□□□□ 0.1
POLR2IP36954 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.65■□□□□ 0.1
POLR2IP36954 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
POLR2IP36954 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
POLR2IP36954 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
POLR2IP36954 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
POLR2IP36954 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
POLR2IP36954 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
POLR2IP36954 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC15.65■□□□□ 0.1
POLR2IP36954 SPDYE15P-201ENST00000424157 909 ntBASIC15.65■□□□□ 0.1
POLR2IP36954 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
POLR2IP36954 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC15.65■□□□□ 0.1
POLR2IP36954 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC15.65■□□□□ 0.1
POLR2IP36954 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC15.65■□□□□ 0.1
POLR2IP36954 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC15.65■□□□□ 0.1
POLR2IP36954 AC008550.1-201ENST00000511500 884 ntBASIC15.65■□□□□ 0.1
POLR2IP36954 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
POLR2IP36954 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.65■□□□□ 0.1
POLR2IP36954 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC15.65■□□□□ 0.1
POLR2IP36954 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
POLR2IP36954 AC073347.1-201ENST00000421633 2643 ntBASIC15.65■□□□□ 0.1
POLR2IP36954 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
POLR2IP36954 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.65■□□□□ 0.1
POLR2IP36954 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
POLR2IP36954 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
POLR2IP36954 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
POLR2IP36954 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
POLR2IP36954 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
POLR2IP36954 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
POLR2IP36954 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
POLR2IP36954 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
POLR2IP36954 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
POLR2IP36954 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
POLR2IP36954 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
POLR2IP36954 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
POLR2IP36954 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
POLR2IP36954 AC010491.1-201ENST00000563101 2797 ntBASIC15.64■□□□□ 0.09
POLR2IP36954 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
POLR2IP36954 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
POLR2IP36954 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
POLR2IP36954 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
POLR2IP36954 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
POLR2IP36954 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
POLR2IP36954 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
POLR2IP36954 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
POLR2IP36954 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC15.64■□□□□ 0.09
POLR2IP36954 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC15.64■□□□□ 0.09
POLR2IP36954 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
POLR2IP36954 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
POLR2IP36954 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
POLR2IP36954 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.64■□□□□ 0.09
POLR2IP36954 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
POLR2IP36954 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms