Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HOXA9P31269 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HOXA9P31269 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HOXA9P31269 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HOXA9P31269 AC142381.1-201ENST00000426099 345 ntBASIC17.56■□□□□ 0.4
HOXA9P31269 PNKD-204ENST00000436005 978 ntTSL 5 BASIC17.56■□□□□ 0.4
HOXA9P31269 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.56■□□□□ 0.4
HOXA9P31269 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC17.56■□□□□ 0.4
HOXA9P31269 AC097493.3-201ENST00000509725 367 ntBASIC17.56■□□□□ 0.4
HOXA9P31269 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.56■□□□□ 0.4
HOXA9P31269 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HOXA9P31269 AF228730.6-201ENST00000641497 218 ntBASIC17.56■□□□□ 0.4
HOXA9P31269 AC084121.3-201ENST00000641716 218 ntBASIC17.56■□□□□ 0.4
HOXA9P31269 AC105233.6-201ENST00000642093 218 ntBASIC17.56■□□□□ 0.4
HOXA9P31269 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.56■□□□□ 0.4
HOXA9P31269 LINC00895-201ENST00000629028 1637 ntBASIC17.56■□□□□ 0.4
HOXA9P31269 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
HOXA9P31269 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HOXA9P31269 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
HOXA9P31269 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HOXA9P31269 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HOXA9P31269 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
HOXA9P31269 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.56■□□□□ 0.4
HOXA9P31269 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HOXA9P31269 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
HOXA9P31269 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HOXA9P31269 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HOXA9P31269 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HOXA9P31269 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
HOXA9P31269 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
HOXA9P31269 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HOXA9P31269 GNAS-203ENST00000306120 1878 ntBASIC17.55■□□□□ 0.4
HOXA9P31269 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.55■□□□□ 0.4
HOXA9P31269 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HOXA9P31269 MIR661-201ENST00000384842 89 ntBASIC17.55■□□□□ 0.4
HOXA9P31269 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC17.55■□□□□ 0.4
HOXA9P31269 AC015922.1-201ENST00000421102 1152 ntBASIC17.55■□□□□ 0.4
HOXA9P31269 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.55■□□□□ 0.4
HOXA9P31269 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.55■□□□□ 0.4
HOXA9P31269 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
HOXA9P31269 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.55■□□□□ 0.4
HOXA9P31269 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.55■□□□□ 0.4
HOXA9P31269 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC17.55■□□□□ 0.4
HOXA9P31269 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.55■□□□□ 0.4
HOXA9P31269 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HOXA9P31269 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.55■□□□□ 0.4
HOXA9P31269 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
HOXA9P31269 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.55■□□□□ 0.4
HOXA9P31269 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.55■□□□□ 0.4
HOXA9P31269 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC17.55■□□□□ 0.4
HOXA9P31269 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HOXA9P31269 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.55■□□□□ 0.4
HOXA9P31269 AC020916.1-201ENST00000587762 1774 ntBASIC17.55■□□□□ 0.4
HOXA9P31269 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.55■□□□□ 0.4
HOXA9P31269 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.55■□□□□ 0.4
HOXA9P31269 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HOXA9P31269 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
HOXA9P31269 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
HOXA9P31269 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HOXA9P31269 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HOXA9P31269 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HOXA9P31269 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.54■□□□□ 0.4
HOXA9P31269 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HOXA9P31269 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HOXA9P31269 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.54■□□□□ 0.4
HOXA9P31269 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HOXA9P31269 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HOXA9P31269 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HOXA9P31269 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HOXA9P31269 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
HOXA9P31269 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC17.54■□□□□ 0.4
HOXA9P31269 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.54■□□□□ 0.4
HOXA9P31269 AC092580.3-201ENST00000430932 139 ntBASIC17.54■□□□□ 0.4
HOXA9P31269 UGT1A2P-201ENST00000454886 866 ntBASIC17.54■□□□□ 0.4
HOXA9P31269 AL512638.1-201ENST00000457493 794 ntBASIC17.54■□□□□ 0.4
HOXA9P31269 KRT18P34-201ENST00000488218 1270 ntBASIC17.54■□□□□ 0.4
HOXA9P31269 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
HOXA9P31269 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HOXA9P31269 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.54■□□□□ 0.4
HOXA9P31269 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HOXA9P31269 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC17.54■□□□□ 0.4
HOXA9P31269 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.54■□□□□ 0.4
HOXA9P31269 AC008761.3-201ENST00000624803 892 ntBASIC17.54■□□□□ 0.4
HOXA9P31269 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HOXA9P31269 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
HOXA9P31269 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HOXA9P31269 AC138932.1-201ENST00000534164 6830 ntBASIC17.54■□□□□ 0.4
HOXA9P31269 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
HOXA9P31269 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HOXA9P31269 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HOXA9P31269 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
HOXA9P31269 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOXA9P31269 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOXA9P31269 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HOXA9P31269 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOXA9P31269 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.53■□□□□ 0.4
HOXA9P31269 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOXA9P31269 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOXA9P31269 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOXA9P31269 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms