Protein–RNA interactions for Protein: P18433

PTPRA, Receptor-type tyrosine-protein phosphatase alpha, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRAP18433 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC19.45■□□□□ 0.7
PTPRAP18433 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC19.45■□□□□ 0.7
PTPRAP18433 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC19.45■□□□□ 0.7
PTPRAP18433 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PTPRAP18433 TMPRSS11CP-201ENST00000453277 683 ntBASIC19.45■□□□□ 0.7
PTPRAP18433 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
PTPRAP18433 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC19.45■□□□□ 0.7
PTPRAP18433 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC19.45■□□□□ 0.7
PTPRAP18433 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC19.45■□□□□ 0.7
PTPRAP18433 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC19.45■□□□□ 0.7
PTPRAP18433 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTPRAP18433 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTPRAP18433 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.45■□□□□ 0.7
PTPRAP18433 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC19.45■□□□□ 0.7
PTPRAP18433 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC19.45■□□□□ 0.7
PTPRAP18433 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTPRAP18433 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PTPRAP18433 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
PTPRAP18433 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTPRAP18433 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTPRAP18433 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTPRAP18433 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PTPRAP18433 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PTPRAP18433 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTPRAP18433 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.44■□□□□ 0.7
PTPRAP18433 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTPRAP18433 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.44■□□□□ 0.7
PTPRAP18433 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PTPRAP18433 AL390961.4-201ENST00000623958 2535 ntBASIC19.44■□□□□ 0.7
PTPRAP18433 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PTPRAP18433 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PTPRAP18433 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PTPRAP18433 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
PTPRAP18433 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC19.44■□□□□ 0.7
PTPRAP18433 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC19.44■□□□□ 0.7
PTPRAP18433 NME2P1-201ENST00000426182 414 ntBASIC19.44■□□□□ 0.7
PTPRAP18433 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC19.44■□□□□ 0.7
PTPRAP18433 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC19.44■□□□□ 0.7
PTPRAP18433 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
PTPRAP18433 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC19.44■□□□□ 0.7
PTPRAP18433 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC19.44■□□□□ 0.7
PTPRAP18433 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
PTPRAP18433 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.44■□□□□ 0.7
PTPRAP18433 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC19.44■□□□□ 0.7
PTPRAP18433 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PTPRAP18433 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC19.44■□□□□ 0.7
PTPRAP18433 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PTPRAP18433 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.43■□□□□ 0.7
PTPRAP18433 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PTPRAP18433 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
PTPRAP18433 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTPRAP18433 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
PTPRAP18433 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
PTPRAP18433 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PTPRAP18433 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
PTPRAP18433 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTPRAP18433 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTPRAP18433 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
PTPRAP18433 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTPRAP18433 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTPRAP18433 CALY-202ENST00000368555 783 ntTSL 2 BASIC19.43■□□□□ 0.7
PTPRAP18433 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC19.43■□□□□ 0.7
PTPRAP18433 AC009477.1-201ENST00000452936 217 ntBASIC19.43■□□□□ 0.7
PTPRAP18433 HLA-J-202ENST00000469281 1241 ntBASIC19.43■□□□□ 0.7
PTPRAP18433 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PTPRAP18433 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTPRAP18433 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC19.43■□□□□ 0.7
PTPRAP18433 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTPRAP18433 AC004233.3-201ENST00000607794 1269 ntBASIC19.43■□□□□ 0.7
PTPRAP18433 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PTPRAP18433 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTPRAP18433 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC19.43■□□□□ 0.7
PTPRAP18433 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTPRAP18433 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTPRAP18433 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTPRAP18433 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PTPRAP18433 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC19.43■□□□□ 0.7
PTPRAP18433 AL035456.1-201ENST00000456064 1369 ntBASIC19.43■□□□□ 0.7
PTPRAP18433 AC020763.4-201ENST00000623414 4170 ntBASIC19.43■□□□□ 0.7
PTPRAP18433 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PTPRAP18433 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PTPRAP18433 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPRAP18433 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.42■□□□□ 0.7
PTPRAP18433 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PTPRAP18433 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPRAP18433 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPRAP18433 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.42■□□□□ 0.7
PTPRAP18433 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.42■□□□□ 0.7
PTPRAP18433 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPRAP18433 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPRAP18433 BOC-212ENST00000485230 2173 ntTSL 2 BASIC19.42■□□□□ 0.7
PTPRAP18433 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPRAP18433 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
PTPRAP18433 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PTPRAP18433 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTPRAP18433 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC19.42■□□□□ 0.7
PTPRAP18433 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC19.42■□□□□ 0.7
PTPRAP18433 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC19.42■□□□□ 0.7
PTPRAP18433 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PTPRAP18433 REEP4-207ENST00000523293 913 ntTSL 3 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms