Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 REXO1L3P-201ENST00000622202 1288 ntBASIC13.28□□□□□ -0.28
CD28P10747 AC093028.1-201ENST00000622998 982 ntBASIC13.28□□□□□ -0.28
CD28P10747 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC13.28□□□□□ -0.28
CD28P10747 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CD28P10747 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
CD28P10747 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CD28P10747 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC13.28□□□□□ -0.28
CD28P10747 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CD28P10747 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.28□□□□□ -0.28
CD28P10747 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC13.28□□□□□ -0.28
CD28P10747 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CD28P10747 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CD28P10747 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CD28P10747 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CD28P10747 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC13.28□□□□□ -0.28
CD28P10747 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC13.28□□□□□ -0.28
CD28P10747 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CD28P10747 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CD28P10747 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
CD28P10747 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
CD28P10747 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CD28P10747 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CD28P10747 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
CD28P10747 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CD28P10747 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CD28P10747 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC13.27□□□□□ -0.28
CD28P10747 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
CD28P10747 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
CD28P10747 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
CD28P10747 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
CD28P10747 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CD28P10747 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC13.27□□□□□ -0.28
CD28P10747 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CD28P10747 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
CD28P10747 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CD28P10747 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
CD28P10747 PNMT-202ENST00000394246 821 ntTSL 2 BASIC13.27□□□□□ -0.29
CD28P10747 AC004461.1-201ENST00000412461 403 ntBASIC13.27□□□□□ -0.29
CD28P10747 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC13.27□□□□□ -0.29
CD28P10747 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CD28P10747 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC13.27□□□□□ -0.29
CD28P10747 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC13.27□□□□□ -0.29
CD28P10747 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC13.27□□□□□ -0.29
CD28P10747 AC004449.1-201ENST00000564240 433 ntBASIC13.27□□□□□ -0.29
CD28P10747 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC13.27□□□□□ -0.29
CD28P10747 AL513210.1-201ENST00000629608 234 ntBASIC13.27□□□□□ -0.29
CD28P10747 AC105339.1-204ENST00000636249 355 ntBASIC13.27□□□□□ -0.29
CD28P10747 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC13.27□□□□□ -0.29
CD28P10747 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CD28P10747 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC13.27□□□□□ -0.29
CD28P10747 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CD28P10747 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CD28P10747 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC13.27□□□□□ -0.29
CD28P10747 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
CD28P10747 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CD28P10747 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC13.27□□□□□ -0.29
CD28P10747 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC13.27□□□□□ -0.29
CD28P10747 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC13.27□□□□□ -0.29
CD28P10747 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CD28P10747 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CD28P10747 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC13.27□□□□□ -0.29
CD28P10747 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
CD28P10747 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CD28P10747 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CD28P10747 AC020916.1-201ENST00000587762 1774 ntBASIC13.27□□□□□ -0.29
CD28P10747 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
CD28P10747 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC13.27□□□□□ -0.29
CD28P10747 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CD28P10747 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CD28P10747 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CD28P10747 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CD28P10747 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CD28P10747 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CD28P10747 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CD28P10747 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CD28P10747 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
CD28P10747 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
CD28P10747 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CD28P10747 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
CD28P10747 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
CD28P10747 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CD28P10747 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CD28P10747 AL139400.1-201ENST00000366220 510 ntBASIC13.26□□□□□ -0.29
CD28P10747 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC13.26□□□□□ -0.29
CD28P10747 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CD28P10747 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
CD28P10747 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CD28P10747 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC13.26□□□□□ -0.29
CD28P10747 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CD28P10747 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC13.26□□□□□ -0.29
CD28P10747 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CD28P10747 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC13.26□□□□□ -0.29
CD28P10747 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CD28P10747 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC13.26□□□□□ -0.29
CD28P10747 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
CD28P10747 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
CD28P10747 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC13.26□□□□□ -0.29
CD28P10747 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC13.26□□□□□ -0.29
CD28P10747 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC13.26□□□□□ -0.29
CD28P10747 RPL28-209ENST00000560055 670 ntTSL 3 BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms