Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HOXC6P09630 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
HOXC6P09630 GRAMD4P3-201ENST00000621665 1669 ntBASIC19.04■□□□□ 0.64
HOXC6P09630 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
HOXC6P09630 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
HOXC6P09630 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HOXC6P09630 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HOXC6P09630 AL355312.1-201ENST00000407115 2176 ntBASIC19.03■□□□□ 0.64
HOXC6P09630 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
HOXC6P09630 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
HOXC6P09630 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19.03■□□□□ 0.64
HOXC6P09630 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC19.03■□□□□ 0.64
HOXC6P09630 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HOXC6P09630 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC19.03■□□□□ 0.64
HOXC6P09630 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC19.03■□□□□ 0.64
HOXC6P09630 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC19.03■□□□□ 0.64
HOXC6P09630 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC19.03■□□□□ 0.64
HOXC6P09630 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC19.03■□□□□ 0.64
HOXC6P09630 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC19.03■□□□□ 0.64
HOXC6P09630 COQ9-214ENST00000567933 882 ntTSL 3 BASIC19.03■□□□□ 0.64
HOXC6P09630 AC021097.1-201ENST00000607902 574 ntBASIC19.03■□□□□ 0.64
HOXC6P09630 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HOXC6P09630 NARF-206ENST00000457415 1668 ntTSL 5 BASIC19.03■□□□□ 0.64
HOXC6P09630 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
HOXC6P09630 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
HOXC6P09630 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
HOXC6P09630 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HOXC6P09630 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HOXC6P09630 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HOXC6P09630 HARS-204ENST00000438307 1789 ntTSL 2 BASIC19.03■□□□□ 0.64
HOXC6P09630 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HOXC6P09630 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
HOXC6P09630 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HOXC6P09630 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC19.03■□□□□ 0.64
HOXC6P09630 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
HOXC6P09630 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HOXC6P09630 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
HOXC6P09630 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
HOXC6P09630 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
HOXC6P09630 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
HOXC6P09630 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC19.02■□□□□ 0.64
HOXC6P09630 AC022144.1-201ENST00000602255 1580 ntBASIC19.02■□□□□ 0.64
HOXC6P09630 AC067852.2-201ENST00000590513 2313 ntBASIC19.02■□□□□ 0.64
HOXC6P09630 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
HOXC6P09630 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC19.02■□□□□ 0.64
HOXC6P09630 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HOXC6P09630 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HOXC6P09630 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HOXC6P09630 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HOXC6P09630 SPTLC1P1-201ENST00000447199 261 ntBASIC19.02■□□□□ 0.64
HOXC6P09630 HLA-V-204ENST00000476601 1289 ntBASIC19.02■□□□□ 0.64
HOXC6P09630 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
HOXC6P09630 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC19.02■□□□□ 0.64
HOXC6P09630 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC19.02■□□□□ 0.64
HOXC6P09630 GPER1-207ENST00000619052 571 ntTSL 2 BASIC19.02■□□□□ 0.64
HOXC6P09630 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC19.02■□□□□ 0.64
HOXC6P09630 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HOXC6P09630 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HOXC6P09630 LINC00895-201ENST00000629028 1637 ntBASIC19.02■□□□□ 0.64
HOXC6P09630 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HOXC6P09630 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HOXC6P09630 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HOXC6P09630 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HOXC6P09630 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HOXC6P09630 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
HOXC6P09630 FOS-208ENST00000555686 1496 ntTSL 2 BASIC19.02■□□□□ 0.63
HOXC6P09630 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
HOXC6P09630 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
HOXC6P09630 AP3S2-216ENST00000617003 1561 ntBASIC19.02■□□□□ 0.63
HOXC6P09630 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC19.02■□□□□ 0.63
HOXC6P09630 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC19.02■□□□□ 0.63
HOXC6P09630 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HOXC6P09630 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HOXC6P09630 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
HOXC6P09630 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HOXC6P09630 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HOXC6P09630 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.01■□□□□ 0.63
HOXC6P09630 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HOXC6P09630 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HOXC6P09630 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HOXC6P09630 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC19.01■□□□□ 0.63
HOXC6P09630 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC19.01■□□□□ 0.63
HOXC6P09630 MEIS3P1-201ENST00000495167 958 ntBASIC19.01■□□□□ 0.63
HOXC6P09630 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
HOXC6P09630 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC19.01■□□□□ 0.63
HOXC6P09630 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC19.01■□□□□ 0.63
HOXC6P09630 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HOXC6P09630 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC19.01■□□□□ 0.63
HOXC6P09630 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
HOXC6P09630 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
HOXC6P09630 SPDYE12P-201ENST00000618416 771 ntBASIC19.01■□□□□ 0.63
HOXC6P09630 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HOXC6P09630 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
HOXC6P09630 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HOXC6P09630 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HOXC6P09630 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HOXC6P09630 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HOXC6P09630 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
HOXC6P09630 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
HOXC6P09630 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms