Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.58■□□□□ 0.56
CLTAP09496 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CLTAP09496 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLTAP09496 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
CLTAP09496 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLTAP09496 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
CLTAP09496 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLTAP09496 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.58■□□□□ 0.56
CLTAP09496 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CLTAP09496 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLTAP09496 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLTAP09496 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLTAP09496 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLTAP09496 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.58■□□□□ 0.56
CLTAP09496 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
CLTAP09496 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CLTAP09496 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLTAP09496 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLTAP09496 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLTAP09496 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CLTAP09496 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLTAP09496 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.57■□□□□ 0.56
CLTAP09496 AP001094.4-201ENST00000579008 2176 ntBASIC18.57■□□□□ 0.56
CLTAP09496 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLTAP09496 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CLTAP09496 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.57■□□□□ 0.56
CLTAP09496 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
CLTAP09496 PGAM5P1-201ENST00000518923 814 ntBASIC18.57■□□□□ 0.56
CLTAP09496 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.57■□□□□ 0.56
CLTAP09496 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLTAP09496 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.57■□□□□ 0.56
CLTAP09496 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLTAP09496 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLTAP09496 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLTAP09496 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.57■□□□□ 0.56
CLTAP09496 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CLTAP09496 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CLTAP09496 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLTAP09496 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CLTAP09496 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLTAP09496 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.57■□□□□ 0.56
CLTAP09496 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CLTAP09496 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.57■□□□□ 0.56
CLTAP09496 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLTAP09496 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.56■□□□□ 0.56
CLTAP09496 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLTAP09496 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLTAP09496 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLTAP09496 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CLTAP09496 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLTAP09496 AC018695.7-201ENST00000624587 2492 ntBASIC18.56■□□□□ 0.56
CLTAP09496 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLTAP09496 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC18.56■□□□□ 0.56
CLTAP09496 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLTAP09496 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
CLTAP09496 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18.56■□□□□ 0.56
CLTAP09496 SLC25A6P2-201ENST00000497974 877 ntBASIC18.56■□□□□ 0.56
CLTAP09496 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.56■□□□□ 0.56
CLTAP09496 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.56■□□□□ 0.56
CLTAP09496 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CLTAP09496 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.56■□□□□ 0.56
CLTAP09496 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.56■□□□□ 0.56
CLTAP09496 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.56■□□□□ 0.56
CLTAP09496 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.56■□□□□ 0.56
CLTAP09496 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CLTAP09496 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CLTAP09496 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.56■□□□□ 0.56
CLTAP09496 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.56■□□□□ 0.56
CLTAP09496 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLTAP09496 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.56■□□□□ 0.56
CLTAP09496 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CLTAP09496 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLTAP09496 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CLTAP09496 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
CLTAP09496 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CLTAP09496 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLTAP09496 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLTAP09496 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLTAP09496 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLTAP09496 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLTAP09496 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLTAP09496 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.55■□□□□ 0.56
CLTAP09496 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CLTAP09496 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLTAP09496 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLTAP09496 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLTAP09496 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLTAP09496 IGLL3P-201ENST00000412472 434 ntBASIC18.55■□□□□ 0.56
CLTAP09496 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLTAP09496 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.55■□□□□ 0.56
CLTAP09496 KRT18P2-201ENST00000447938 1258 ntBASIC18.55■□□□□ 0.56
CLTAP09496 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC18.55■□□□□ 0.56
CLTAP09496 NMU-202ENST00000505262 693 ntTSL 3 BASIC18.55■□□□□ 0.56
CLTAP09496 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CLTAP09496 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CLTAP09496 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLTAP09496 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.55■□□□□ 0.56
CLTAP09496 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CLTAP09496 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
CLTAP09496 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms