Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PDGFAP04085 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PDGFAP04085 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PDGFAP04085 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.92■□□□□ 0.14
PDGFAP04085 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC15.92■□□□□ 0.14
PDGFAP04085 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
PDGFAP04085 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PDGFAP04085 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
PDGFAP04085 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.92■□□□□ 0.14
PDGFAP04085 AC103702.1-201ENST00000548801 2630 ntBASIC15.92■□□□□ 0.14
PDGFAP04085 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PDGFAP04085 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PDGFAP04085 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PDGFAP04085 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.91■□□□□ 0.14
PDGFAP04085 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
PDGFAP04085 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PDGFAP04085 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PDGFAP04085 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PDGFAP04085 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PDGFAP04085 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.91■□□□□ 0.14
PDGFAP04085 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PDGFAP04085 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PDGFAP04085 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PDGFAP04085 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PDGFAP04085 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.91■□□□□ 0.14
PDGFAP04085 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PDGFAP04085 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
PDGFAP04085 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PDGFAP04085 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.91■□□□□ 0.14
PDGFAP04085 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.91■□□□□ 0.14
PDGFAP04085 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.91■□□□□ 0.14
PDGFAP04085 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.91■□□□□ 0.14
PDGFAP04085 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PDGFAP04085 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.91■□□□□ 0.14
PDGFAP04085 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.91■□□□□ 0.14
PDGFAP04085 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PDGFAP04085 AC109322.1-201ENST00000524499 1264 ntBASIC15.91■□□□□ 0.14
PDGFAP04085 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.91■□□□□ 0.14
PDGFAP04085 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC15.91■□□□□ 0.14
PDGFAP04085 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
PDGFAP04085 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PDGFAP04085 AL096865.1-201ENST00000606796 927 ntBASIC15.91■□□□□ 0.14
PDGFAP04085 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.91■□□□□ 0.14
PDGFAP04085 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PDGFAP04085 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PDGFAP04085 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
PDGFAP04085 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PDGFAP04085 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PDGFAP04085 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
PDGFAP04085 PI4KAP1-204ENST00000612579 1703 ntBASIC15.91■□□□□ 0.14
PDGFAP04085 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
PDGFAP04085 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC15.91■□□□□ 0.14
PDGFAP04085 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.91■□□□□ 0.14
PDGFAP04085 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
PDGFAP04085 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PDGFAP04085 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PDGFAP04085 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.9■□□□□ 0.14
PDGFAP04085 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
PDGFAP04085 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.9■□□□□ 0.14
PDGFAP04085 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PDGFAP04085 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PDGFAP04085 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PDGFAP04085 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PDGFAP04085 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.9■□□□□ 0.14
PDGFAP04085 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PDGFAP04085 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC15.9■□□□□ 0.14
PDGFAP04085 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PDGFAP04085 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC15.9■□□□□ 0.14
PDGFAP04085 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.9■□□□□ 0.14
PDGFAP04085 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.9■□□□□ 0.14
PDGFAP04085 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.9■□□□□ 0.14
PDGFAP04085 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.9■□□□□ 0.14
PDGFAP04085 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
PDGFAP04085 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.9■□□□□ 0.14
PDGFAP04085 COX20P2-201ENST00000452636 358 ntBASIC15.9■□□□□ 0.14
PDGFAP04085 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.9■□□□□ 0.14
PDGFAP04085 HLA-J-203ENST00000494367 1087 ntBASIC15.9■□□□□ 0.14
PDGFAP04085 CXCL1P1-201ENST00000502804 216 ntBASIC15.9■□□□□ 0.14
PDGFAP04085 IGHV3-52-201ENST00000519770 353 ntBASIC15.9■□□□□ 0.14
PDGFAP04085 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC15.9■□□□□ 0.14
PDGFAP04085 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.9■□□□□ 0.14
PDGFAP04085 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.9■□□□□ 0.14
PDGFAP04085 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.9■□□□□ 0.14
PDGFAP04085 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PDGFAP04085 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
PDGFAP04085 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.9■□□□□ 0.14
PDGFAP04085 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.9■□□□□ 0.14
PDGFAP04085 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
PDGFAP04085 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC15.9■□□□□ 0.14
PDGFAP04085 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PDGFAP04085 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PDGFAP04085 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PDGFAP04085 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PDGFAP04085 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PDGFAP04085 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PDGFAP04085 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
PDGFAP04085 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.89■□□□□ 0.13
PDGFAP04085 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PDGFAP04085 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
PDGFAP04085 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms