Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHRNA1P02708 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CHRNA1P02708 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.33■□□□□ 0.53
CHRNA1P02708 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.33■□□□□ 0.53
CHRNA1P02708 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.33■□□□□ 0.53
CHRNA1P02708 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
CHRNA1P02708 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC18.33■□□□□ 0.53
CHRNA1P02708 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
CHRNA1P02708 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHRNA1P02708 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHRNA1P02708 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.33■□□□□ 0.53
CHRNA1P02708 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC18.33■□□□□ 0.53
CHRNA1P02708 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHRNA1P02708 AC108860.2-201ENST00000562760 2183 ntBASIC18.33■□□□□ 0.52
CHRNA1P02708 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CHRNA1P02708 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHRNA1P02708 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHRNA1P02708 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC18.33■□□□□ 0.52
CHRNA1P02708 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC18.33■□□□□ 0.52
CHRNA1P02708 AC142381.1-201ENST00000426099 345 ntBASIC18.33■□□□□ 0.52
CHRNA1P02708 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC18.33■□□□□ 0.52
CHRNA1P02708 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC18.33■□□□□ 0.52
CHRNA1P02708 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC18.33■□□□□ 0.52
CHRNA1P02708 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC18.33■□□□□ 0.52
CHRNA1P02708 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHRNA1P02708 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CHRNA1P02708 AC190387.1-201ENST00000551683 408 ntBASIC18.33■□□□□ 0.52
CHRNA1P02708 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC18.33■□□□□ 0.52
CHRNA1P02708 PRR29-209ENST00000582540 967 ntTSL 2 BASIC18.33■□□□□ 0.52
CHRNA1P02708 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC18.33■□□□□ 0.52
CHRNA1P02708 COQ4-205ENST00000609948 956 ntTSL 2 BASIC18.33■□□□□ 0.52
CHRNA1P02708 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHRNA1P02708 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHRNA1P02708 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
CHRNA1P02708 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CHRNA1P02708 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CHRNA1P02708 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CHRNA1P02708 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CHRNA1P02708 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHRNA1P02708 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.33■□□□□ 0.52
CHRNA1P02708 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHRNA1P02708 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CHRNA1P02708 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHRNA1P02708 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHRNA1P02708 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHRNA1P02708 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHRNA1P02708 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC18.32■□□□□ 0.52
CHRNA1P02708 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CHRNA1P02708 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHRNA1P02708 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CHRNA1P02708 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.32■□□□□ 0.52
CHRNA1P02708 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHRNA1P02708 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHRNA1P02708 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHRNA1P02708 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC18.32■□□□□ 0.52
CHRNA1P02708 AC015922.1-201ENST00000421102 1152 ntBASIC18.32■□□□□ 0.52
CHRNA1P02708 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC18.32■□□□□ 0.52
CHRNA1P02708 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC18.32■□□□□ 0.52
CHRNA1P02708 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC18.32■□□□□ 0.52
CHRNA1P02708 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC18.32■□□□□ 0.52
CHRNA1P02708 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.32■□□□□ 0.52
CHRNA1P02708 AC021097.1-201ENST00000607902 574 ntBASIC18.32■□□□□ 0.52
CHRNA1P02708 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.32■□□□□ 0.52
CHRNA1P02708 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHRNA1P02708 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CHRNA1P02708 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHRNA1P02708 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.32■□□□□ 0.52
CHRNA1P02708 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.32■□□□□ 0.52
CHRNA1P02708 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHRNA1P02708 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHRNA1P02708 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.32■□□□□ 0.52
CHRNA1P02708 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CHRNA1P02708 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHRNA1P02708 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC18.32■□□□□ 0.52
CHRNA1P02708 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHRNA1P02708 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNA1P02708 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CHRNA1P02708 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNA1P02708 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.31■□□□□ 0.52
CHRNA1P02708 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.31■□□□□ 0.52
CHRNA1P02708 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CHRNA1P02708 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNA1P02708 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CHRNA1P02708 STARD13-205ENST00000439831 945 ntTSL 2 BASIC18.31■□□□□ 0.52
CHRNA1P02708 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CHRNA1P02708 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC18.31■□□□□ 0.52
CHRNA1P02708 POLD4-211ENST00000539074 714 ntTSL 3 BASIC18.31■□□□□ 0.52
CHRNA1P02708 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC18.31■□□□□ 0.52
CHRNA1P02708 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC18.31■□□□□ 0.52
CHRNA1P02708 AF228730.6-201ENST00000641497 218 ntBASIC18.31■□□□□ 0.52
CHRNA1P02708 AC084121.3-201ENST00000641716 218 ntBASIC18.31■□□□□ 0.52
CHRNA1P02708 AC105233.6-201ENST00000642093 218 ntBASIC18.31■□□□□ 0.52
CHRNA1P02708 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNA1P02708 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNA1P02708 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNA1P02708 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNA1P02708 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CHRNA1P02708 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNA1P02708 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNA1P02708 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms